RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 CNBD2Q96M20 576 aa10.11□□□□□ -0.79
RTN3-207ENST00000536011 SDHAF2Q9NX18 166 aa10.11□□□□□ -0.79
RTN3-207ENST00000536011 TRDV1A0A1B0GX56 115 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 MRPS14O60783 128 aaKnown RBP10.1□□□□□ -0.79
RTN3-207ENST00000536011 SCGNO76038 276 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 BRI3O95415 125 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 GSTT2P0CG29 244 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 GSTT2BP0CG30 244 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 OR10A3P58181 314 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 SSX1Q16384 188 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 VMA21Q3ZAQ7 101 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 TMEM177Q53S58 311 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 Q6ZS49 121 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 PHB2Q99623 299 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 RSRP1Q9BUV0 290 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 ZMAT4Q9H898 229 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 KCNK7Q9Y2U2 307 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 RYR3Q15413 4870 aa10.1□□□□□ -0.79
RTN3-207ENST00000536011 RAB27BO00194 218 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 IGLV2-23P01705 113 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 DTYMKP23919 212 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 LINC00205P59089 165 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 GABARAPL2P60520 117 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 TATDN3Q17R31 274 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 BVESQ8NE79 360 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 OR5T1Q8NG75 326 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 OSR1Q8TAX0 266 aaPredicted RBP10.09□□□□□ -0.79
RTN3-207ENST00000536011 USMG5Q96IX5 58 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 RCHY1Q96PM5 261 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 TINAGL1Q9GZM7 467 aaPredicted RBP10.09□□□□□ -0.79
RTN3-207ENST00000536011 ATG5Q9H1Y0 275 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 COA4Q9NYJ1 87 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 RAB26Q9ULW5 256 aa10.09□□□□□ -0.79
RTN3-207ENST00000536011 DNAH7Q8WXX0 4024 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 MPPED1O15442 326 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 SLC22A5O76082 557 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 ACTL6BO94805 426 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 CRYGBP07316 175 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 CTXN2P0C2S0 81 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 FRMD6-AS1P0C7T7 363 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 CD36P16671 472 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 UBE2KP61086 200 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 PJVKQ0ZLH3 352 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 PLA2G7Q13093 441 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 SGPP2Q8IWX5 399 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 TEX45Q8NA69 505 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 MAFIPQ8WZ33 124 aa10.08□□□□□ -0.8
RTN3-207ENST00000536011 ZNF230Q9UIE0 474 aaPredicted RBP10.08□□□□□ -0.8
RTN3-207ENST00000536011 MRPS7Q9Y2R9 242 aaKnown RBP10.08□□□□□ -0.8
RTN3-207ENST00000536011 A0A0B4J203 849 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 H0Y980 276 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 CRYZL1O95825 349 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 IGLV1-51P01701 117 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 DUTP33316 252 aaKnown RBP10.07□□□□□ -0.8
RTN3-207ENST00000536011 SSBP2P81877 361 aaPredicted RBP10.07□□□□□ -0.8
RTN3-207ENST00000536011 PRSS8Q16651 343 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 C22orf42Q6IC83 251 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 SBSPONQ8IVN8 264 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 H1FOOQ8IZA3 346 aaPredicted RBP10.07□□□□□ -0.8
RTN3-207ENST00000536011 OR9G4Q8NGQ1 327 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 FCGR1BQ92637 280 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 SPIN2AQ99865 258 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 SPIN2BQ9BPZ2 258 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 Q9H521 79 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 PEF1Q9UBV8 284 aaKnown RBP10.07□□□□□ -0.8
RTN3-207ENST00000536011 PRELID3BQ9Y3B1 194 aa10.07□□□□□ -0.8
RTN3-207ENST00000536011 HUWE1Q7Z6Z7 4374 aaKnown RBP10.06□□□□□ -0.8
RTN3-207ENST00000536011 ANKRD34BA5PLL1 514 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 FAM223BA6NKX1 122 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 TRIM64CA6NLI5 447 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 NOTOA8MTQ0 251 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 OR9G9P0C7N8 305 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 FGF9P31371 208 aaPredicted RBP10.06□□□□□ -0.8
RTN3-207ENST00000536011 KLF5Q13887 457 aaPredicted RBP10.06□□□□□ -0.8
RTN3-207ENST00000536011 TNXAQ16473 311 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 RPEL1Q2QD12 228 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 FAM209BQ5JX69 171 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 HACD4Q5VWC8 232 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 KCTD9Q7L273 389 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 OVCH2Q7RTZ1 564 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 TPRA1Q86W33 373 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 FAM223AQ8IWN6 122 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 ZNF645Q8N7E2 425 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 MUC7Q8TAX7 377 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 ACOT12Q8WYK0 555 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 DDB2Q92466 427 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 DCSTAMPQ9H295 470 aa10.06□□□□□ -0.8
RTN3-207ENST00000536011 SHISA3A0PJX4 238 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 MSGN1A6NI15 193 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 TUSC2O75896 110 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 OR2A4O95047 310 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 PSMB9P28065 219 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 SYNJ2BPP57105 145 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 GNG2P59768 71 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 CDK10Q15131 360 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 CDNFQ49AH0 187 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 UBE2UQ5VVX9 321 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 LCN12Q6JVE5 192 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 GTSCR1Q86UQ5 136 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms