RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ADTRPQ96IZ2 230 aa12.48□□□□□ -0.41
CLSTN3-204ENST00000535313 TMEM68Q96MH6 324 aa12.48□□□□□ -0.41
CLSTN3-204ENST00000535313 OR4C12Q96R67 309 aa12.48□□□□□ -0.41
CLSTN3-204ENST00000535313 A0A0G2JLM5 398 aa12.47□□□□□ -0.41
CLSTN3-204ENST00000535313 TRIM64CA6NLI5 447 aa12.47□□□□□ -0.41
CLSTN3-204ENST00000535313 SMIM18P0DKX4 95 aa12.47□□□□□ -0.41
CLSTN3-204ENST00000535313 SPNP16150 400 aa12.47□□□□□ -0.41
CLSTN3-204ENST00000535313 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
CLSTN3-204ENST00000535313 UBE2UQ5VVX9 321 aa12.47□□□□□ -0.41
CLSTN3-204ENST00000535313 Q6ZS49 121 aa12.47□□□□□ -0.41
CLSTN3-204ENST00000535313 BVESQ8NE79 360 aa12.47□□□□□ -0.41
CLSTN3-204ENST00000535313 ELOVL1Q9BW60 279 aa12.47□□□□□ -0.41
CLSTN3-204ENST00000535313 RANGRFQ9HD47 186 aaPredicted RBP12.47□□□□□ -0.41
CLSTN3-204ENST00000535313 STAB2Q8WWQ8 2551 aa12.47□□□□□ -0.41
CLSTN3-204ENST00000535313 CRYGBP07316 175 aa12.46□□□□□ -0.41
CLSTN3-204ENST00000535313 GP9P14770 177 aa12.46□□□□□ -0.41
CLSTN3-204ENST00000535313 ZP3P21754 424 aa12.46□□□□□ -0.41
CLSTN3-204ENST00000535313 DTYMKP23919 212 aa12.46□□□□□ -0.41
CLSTN3-204ENST00000535313 PSMB9P28065 219 aa12.46□□□□□ -0.41
CLSTN3-204ENST00000535313 VMA21Q3ZAQ7 101 aa12.46□□□□□ -0.41
CLSTN3-204ENST00000535313 TMEM177Q53S58 311 aa12.46□□□□□ -0.41
CLSTN3-204ENST00000535313 H1FOOQ8IZA3 346 aaPredicted RBP12.46□□□□□ -0.41
CLSTN3-204ENST00000535313 C5orf30Q96GV9 206 aa12.46□□□□□ -0.41
CLSTN3-204ENST00000535313 SMIM30A4D0T7 59 aa12.45□□□□□ -0.42
CLSTN3-204ENST00000535313 NOTOA8MTQ0 251 aa12.45□□□□□ -0.42
CLSTN3-204ENST00000535313 SSBP2P81877 361 aaPredicted RBP12.45□□□□□ -0.42
CLSTN3-204ENST00000535313 CDNFQ49AH0 187 aa12.45□□□□□ -0.42
CLSTN3-204ENST00000535313 NR2C2APQ86WQ0 139 aa12.45□□□□□ -0.42
CLSTN3-204ENST00000535313 FCGR1BQ92637 280 aa12.45□□□□□ -0.42
CLSTN3-204ENST00000535313 PHB2Q99623 299 aa12.45□□□□□ -0.42
CLSTN3-204ENST00000535313 SRRM4A7MD48 611 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 CRYZL1O95825 349 aa12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 CTXN2P0C2S0 81 aa12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 FGF9P31371 208 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 DUTP33316 252 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 UBE2KP61086 200 aa12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 HACD4Q5VWC8 232 aa12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 TEX45Q8NA69 505 aa12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 RSRP1Q9BUV0 290 aa12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 ST6GALNAC5Q9BVH7 336 aa12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 TXNL4BQ9NX01 149 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 ELF5Q9UKW6 265 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 STUB1Q9UNE7 303 aa12.44□□□□□ -0.42
CLSTN3-204ENST00000535313 IGKV1D-8A0A087WSZ0 117 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 ANKRD34BA5PLL1 514 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 SCGNO76038 276 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 TNFAIP8O95379 198 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 BRI3O95415 125 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 AADACP22760 399 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 TPRA1Q86W33 373 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 ANKRD13BQ86YJ7 626 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 OSR1Q8TAX0 266 aaPredicted RBP12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 DDB2Q92466 427 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 TINAGL1Q9GZM7 467 aaPredicted RBP12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 DCSTAMPQ9H295 470 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 COA4Q9NYJ1 87 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 DAPK2Q9UIK4 370 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 SSR3Q9UNL2 185 aa12.43□□□□□ -0.42
CLSTN3-204ENST00000535313 MSGN1A6NI15 193 aa12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 LINC00473A8K010 186 aa12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 J3QRK9 145 aa12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 CREBL2O60519 120 aaPredicted RBP12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 ACTL6BO94805 426 aa12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 TNXAQ16473 311 aa12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 PRSS8Q16651 343 aa12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 OVCH2Q7RTZ1 564 aa12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 ZNF645Q8N7E2 425 aa12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 USMG5Q96IX5 58 aa12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 DCUN1D5Q9BTE7 237 aa12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 OR2W1Q9Y3N9 320 aa12.42□□□□□ -0.42
CLSTN3-204ENST00000535313 TMEM235A6NFC5 223 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 MPPED1O15442 326 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 SLC22A5O76082 557 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 FRMD6-AS1P0C7T7 363 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 APELAP0DMC3 54 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 CD36P16671 472 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 NFYAP23511 347 aaPredicted RBP12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 GNG2P59768 71 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 NEDD8Q15843 81 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 SFXN4Q6P4A7 337 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 IDO2Q6ZQW0 420 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 SBSPONQ8IVN8 264 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 TSPAN14Q8NG11 270 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 NUDCD2Q8WVJ2 157 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 SRSF12Q8WXF0 261 aaKnown RBP12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 ACOT12Q8WYK0 555 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 PEF1Q9UBV8 284 aaKnown RBP12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 MRPS7Q9Y2R9 242 aaKnown RBP12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 PRELID3BQ9Y3B1 194 aa12.41□□□□□ -0.42
CLSTN3-204ENST00000535313 HUWE1Q7Z6Z7 4374 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 TNCP24821 2201 aa12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 FCGR3BO75015 233 aa12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 TUSC2O75896 110 aa12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 IGLV1-51P01701 117 aa12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 OR9G9P0C7N8 305 aa12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 DEFA5Q01523 94 aa12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 KLF5Q13887 457 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 TATDN3Q17R31 274 aa12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 MRGPRG-AS1Q2M3A8 158 aa12.4□□□□□ -0.42
CLSTN3-204ENST00000535313 CNIH2Q6PI25 160 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms