RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 CLDN12P56749 244 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 RITA1Q96K30 269 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 FAM212BQ9NTI7 297 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-217ENST00000534699 SPATA2Q9UM82 520 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 RBM7Q9Y580 266 aaKnown RBP8.05□□□□□ -1.12
CSDE1-217ENST00000534699 WSB1Q9Y6I7 421 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 SHOXO15266 292 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 GNB3P16520 340 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 CD69Q07108 199 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 C18orf65Q6ZTR6 163 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 OR4S2Q8NH73 311 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 HARBI1Q96MB7 349 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 ATP6V0BQ99437 205 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 ANXA10Q9UJ72 324 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 RBMX2Q9Y388 322 aaKnown RBP8.05□□□□□ -1.12
CSDE1-217ENST00000534699 SHISA3A0PJX4 238 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 G3V318 75 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 HIST1H1BP16401 226 aaKnown RBP8.04□□□□□ -1.12
CSDE1-217ENST00000534699 OR10A3P58181 314 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 BVESQ8NE79 360 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 CD300LFQ8TDQ1 290 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 WWC2-AS2Q96NR7 200 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 SPIN2AQ99865 258 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 SPIN2BQ9BPZ2 258 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 RHBDL2Q9NX52 303 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 HRASP01112 189 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 OR9G9P0C7N8 305 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 SLC2A2P11168 524 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-217ENST00000534699 GNB1P62873 340 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 NDPQ00604 133 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 POU2AF1Q16633 256 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 PRSS8Q16651 343 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 ECSCRQ19T08 205 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 ASPHD1Q5U4P2 390 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 ZNF343Q6P1L6 599 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 HOGA1Q86XE5 327 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 LAX1Q8IWV1 398 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 ABHD5Q8WTS1 349 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 PARP12Q9H0J9 701 aaKnown RBP8.04□□□□□ -1.12
CSDE1-217ENST00000534699 KLK15Q9H2R5 256 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 ZNF257Q9Y2Q1 563 aa8.04□□□□□ -1.12
CSDE1-217ENST00000534699 PKD1L1Q8TDX9 2849 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 A0A087WXM4 84 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 BET1O15155 118 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 CNIH1O95406 144 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 TRGV3P03979 118 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 TPPP2P59282 170 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 IGSF11Q5DX21 431 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 DEFB121Q5J5C9 76 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 HSD17B13Q7Z5P4 300 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-217ENST00000534699 TTC9CQ8N5M4 171 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 DCUN1D4Q92564 292 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 OR4C12Q96R67 309 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 ANAPC10Q9UM13 185 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 FBXO7Q9Y3I1 522 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 H0Y980 276 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 SLC25A17O43808 307 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 DHFRP00374 187 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 ECI1P42126 302 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 EIF4EBP1Q13541 118 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-217ENST00000534699 HIST2H2BDQ6DRA6 164 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 GLDNQ6ZMI3 551 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-217ENST00000534699 TMEM167AQ8TBQ9 72 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 GIMAP1Q8WWP7 306 aa8.03□□□□□ -1.12
CSDE1-217ENST00000534699 NPIPB5A8MRT5 1133 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 FCN1O00602 326 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 CYB5BO43169 146 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 SOX15O60248 233 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 OR2A4O95047 310 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 IGKV1-16P04430 117 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 HOXD3P31249 432 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-217ENST00000534699 RAB25P57735 213 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 CATR1Q13166 79 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 PUSL1Q8N0Z8 303 aaKnown RBP8.02□□□□□ -1.13
CSDE1-217ENST00000534699 OR51E2Q9H255 320 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 SMAD5-AS1Q9Y6J3 95 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 TRRAPQ9Y4A5 3859 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 TRIM64CA6NLI5 447 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 TNFAIP8O95379 198 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 NAT1P18440 290 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 KLF5Q13887 457 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-217ENST00000534699 LFNGQ8NES3 379 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 ACOT12Q8WYK0 555 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 SNAPC3Q92966 411 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 BET1LQ9NYM9 111 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 PEMTQ9UBM1 199 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 PEF1Q9UBV8 284 aaKnown RBP8.02□□□□□ -1.13
CSDE1-217ENST00000534699 DAPK2Q9UIK4 370 aa8.02□□□□□ -1.13
CSDE1-217ENST00000534699 TRBV9A0A0B4J1U6 114 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 XRCC3O43542 346 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 ACTL6BO94805 426 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 NR2C2APQ86WQ0 139 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 LGALS14Q8TCE9 139 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 S100A16Q96FQ6 103 aaKnown RBP8.01□□□□□ -1.13
CSDE1-217ENST00000534699 COMMD9Q9P000 198 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 SDC2P34741 201 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 TAS2R31P59538 309 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 UBE2NLQ5JXB2 153 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 KCTD9Q7L273 389 aa8.01□□□□□ -1.13
CSDE1-217ENST00000534699 C5orf24Q7Z6I8 188 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms