RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 SNAPC3Q92966 411 aa12.44□□□□□ -0.42
PAX6-230ENST00000534390 TAS2R8Q9NYW2 309 aa12.44□□□□□ -0.42
PAX6-230ENST00000534390 ZNF580Q9UK33 172 aa12.44□□□□□ -0.42
PAX6-230ENST00000534390 RBMX2Q9Y388 322 aaKnown RBP12.44□□□□□ -0.42
PAX6-230ENST00000534390 PRELID3BQ9Y3B1 194 aa12.44□□□□□ -0.42
PAX6-230ENST00000534390 NOTCH1P46531 2555 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 TNFSF12O43508 249 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 PSMB8P28062 276 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 PRSS3P35030 304 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 LGALS7P47929 136 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 HERV-K104P61576 105 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 TMEM267Q0VDI3 215 aaPredicted RBP12.43□□□□□ -0.42
PAX6-230ENST00000534390 FXYD3Q14802 87 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 VMA21Q3ZAQ7 101 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 ETV3LQ6ZN32 361 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 TMEM17Q86X19 198 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 MRPL41Q8IXM3 137 aaKnown RBP12.43□□□□□ -0.42
PAX6-230ENST00000534390 AP3S1Q92572 193 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 OR5B12Q96R08 314 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 KLK15Q9H2R5 256 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 EHFQ9NZC4 300 aa12.43□□□□□ -0.42
PAX6-230ENST00000534390 FOXA2Q9Y261 457 aaPredicted RBP12.43□□□□□ -0.42
PAX6-230ENST00000534390 CCL24O00175 119 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 PPYP01298 95 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 IGLV2-23P01705 113 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 APOA1P02647 267 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 PMP2P02689 132 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 ELK1P19419 428 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 SLC6A1P30531 599 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 PJVKQ0ZLH3 352 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 CDK10Q15131 360 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 BEAN1Q3B7T3 259 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 TMEM177Q53S58 311 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 ACTBL2Q562R1 376 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 RNASE12Q5GAN4 147 aaKnown RBP12.42□□□□□ -0.42
PAX6-230ENST00000534390 IDO2Q6ZQW0 420 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 CLVS1Q8IUQ0 354 aaPredicted RBP12.42□□□□□ -0.42
PAX6-230ENST00000534390 LINC00482Q8N8I6 264 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 LFNGQ8NES3 379 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 OR5AP2Q8NGF4 316 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 DDB2Q92466 427 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 RAX2Q96IS3 184 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 GPHA2Q96T91 129 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 SLC5A7Q9GZV3 580 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 ZNF355PQ9NSJ1 428 aa12.42□□□□□ -0.42
PAX6-230ENST00000534390 NOL3O60936 208 aaKnown RBP12.41□□□□□ -0.42
PAX6-230ENST00000534390 PPIFP30405 207 aaKnown RBP12.41□□□□□ -0.42
PAX6-230ENST00000534390 MYCNOSP40205 109 aa12.41□□□□□ -0.42
PAX6-230ENST00000534390 CDX1P47902 265 aaPredicted RBP12.41□□□□□ -0.42
PAX6-230ENST00000534390 ALDH3B2P48448 385 aa12.41□□□□□ -0.42
PAX6-230ENST00000534390 PDLIM3Q53GG5 364 aaPredicted RBP12.41□□□□□ -0.42
PAX6-230ENST00000534390 ZNF562Q6V9R5 426 aa12.41□□□□□ -0.42
PAX6-230ENST00000534390 RNF152Q8N8N0 203 aa12.41□□□□□ -0.42
PAX6-230ENST00000534390 OR5H2Q8NGV7 314 aa12.41□□□□□ -0.42
PAX6-230ENST00000534390 C4orf3Q8WVX3 66 aa12.41□□□□□ -0.42
PAX6-230ENST00000534390 RCC1LQ96I51 464 aaKnown RBP12.41□□□□□ -0.42
PAX6-230ENST00000534390 MS4A10Q96PG2 267 aa12.41□□□□□ -0.42
PAX6-230ENST00000534390 PHB2Q99623 299 aa12.41□□□□□ -0.42
PAX6-230ENST00000534390 HSD17B10Q99714 261 aaKnown RBP12.41□□□□□ -0.42
PAX6-230ENST00000534390 CCL28Q9NRJ3 127 aa12.41□□□□□ -0.42
PAX6-230ENST00000534390 SRRM4A7MD48 611 aaKnown RBP12.4□□□□□ -0.42
PAX6-230ENST00000534390 ARPC1BO15143 372 aaKnown RBP12.4□□□□□ -0.42
PAX6-230ENST00000534390 IGLV2-14P01704 120 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 APELAP0DMC3 54 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 EGR2P11161 476 aaPredicted RBP12.4□□□□□ -0.42
PAX6-230ENST00000534390 ZNF182P17025 639 aaPredicted RBP12.4□□□□□ -0.42
PAX6-230ENST00000534390 CD40LGP29965 261 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 RFX2P48378 723 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 RAB9AP51151 201 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 TAS2R46P59540 309 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 RPL30P62888 115 aaKnown RBP12.4□□□□□ -0.42
PAX6-230ENST00000534390 TNXAQ16473 311 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 TCTEX1D1Q8N7M0 179 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 MINDY2Q8NBR6 621 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 WFDC9Q8NEX5 89 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 OR4S2Q8NH73 311 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 OSR1Q8TAX0 266 aaPredicted RBP12.4□□□□□ -0.42
PAX6-230ENST00000534390 GNB4Q9HAV0 340 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 VSIG4Q9Y279 399 aa12.4□□□□□ -0.42
PAX6-230ENST00000534390 MPPED1O15442 326 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 RGS5O15539 181 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 SOX15O60248 233 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 IGLV1-40P01703 118 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 HLA-DMAP28067 261 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 TPPP2P59282 170 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 UBE2KP61086 200 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 MFSD4AQ8N468 514 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 ZNF491Q8N8L2 437 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 CMTM3Q96MX0 182 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 ZNF2Q9BSG1 426 aaPredicted RBP12.39□□□□□ -0.43
PAX6-230ENST00000534390 NUBP2Q9Y5Y2 271 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 NOTCH3Q9UM47 2321 aa12.39□□□□□ -0.43
PAX6-230ENST00000534390 ACTL6BO94805 426 aa12.38□□□□□ -0.43
PAX6-230ENST00000534390 CRYGBP07316 175 aa12.38□□□□□ -0.43
PAX6-230ENST00000534390 SAA1P0DJI8 122 aaPredicted RBP12.38□□□□□ -0.43
PAX6-230ENST00000534390 HRH1P35367 487 aa12.38□□□□□ -0.43
PAX6-230ENST00000534390 CRIP2P52943 208 aaPredicted RBP12.38□□□□□ -0.43
PAX6-230ENST00000534390 SPCS2Q15005 226 aa12.38□□□□□ -0.43
PAX6-230ENST00000534390 AKIRIN2Q53H80 203 aa12.38□□□□□ -0.43
PAX6-230ENST00000534390 C19orf54Q5BKX5 351 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms