RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 LSM10Q969L4 123 aaKnown RBP16.26■□□□□ 0.19
CAPN1-226ENST00000533820 CFAP47Q6ZTR5 3102 aa16.26■□□□□ 0.19
CAPN1-226ENST00000533820 B4DEV8 164 aa16.26■□□□□ 0.19
CAPN1-226ENST00000533820 SS18L1O75177 396 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-226ENST00000533820 AESQ08117 197 aa16.26■□□□□ 0.19
CAPN1-226ENST00000533820 PSPNO60542 156 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 TFF3Q07654 80 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 LYG1Q8N1E2 194 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 ZG16O60844 167 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 CD46P15529 392 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 MEF2BQ02080 365 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-226ENST00000533820 PNRC1Q12796 327 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-226ENST00000533820 ZNF497Q6ZNH5 498 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 SMIM15Q7Z3B0 74 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 MSL2Q9HCI7 577 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 FKBP11Q9NYL4 201 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 FZR1Q9UM11 496 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 C9orf172C9J069 976 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 TMEM238C9JI98 176 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-226ENST00000533820 TDRG1Q3Y452 100 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 CLUHP3Q96NS8 147 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 ALKBH7Q9BT30 221 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-226ENST00000533820 RTL8AQ9BWD3 113 aa16.25■□□□□ 0.19
CAPN1-226ENST00000533820 NKX6-3A6NJ46 265 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 S1PR2O95136 353 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 IFNA1P01562 189 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 IGHV3-13P01766 116 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 IGHV3-7P01780 117 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 SERF2P84101 59 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 TMEM241Q24JQ0 296 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 ATP1A1-AS1Q5TC04 95 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 SDSLQ96GA7 329 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 PSMG3Q9BT73 122 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-226ENST00000533820 LYZL6O75951 148 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 SLC25A6P12236 298 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 PRSS8Q16651 343 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 TMEM37Q8WXS4 190 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 PCGF1Q9BSM1 259 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 CEP250Q9BV73 2442 aa16.24■□□□□ 0.19
CAPN1-226ENST00000533820 TRBV6-6A0A0A6YYG2 114 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 C17orf98A8MV24 154 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 GZMHP20718 246 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 MEOX1P50221 254 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 FFAR4Q5NUL3 377 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 OR10G4Q8NGN3 311 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 MRGPRDQ8TDS7 321 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 TBX15Q96SF7 602 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 LRP5LA4QPB2 252 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 HSBP1L1C9JCN9 74 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 SMPD2O60906 423 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 RND2P52198 227 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 BSXQ3C1V8 233 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 LINC00596Q86U02 117 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 OR10G9Q8NGN4 311 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 OR10G7Q8NGN6 311 aa16.23■□□□□ 0.19
CAPN1-226ENST00000533820 PAGE4O60829 102 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 CRYAAP02489 173 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 OPN1MWP04001 364 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 OPN1MW2P0DN77 364 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 OPN1MW3P0DN78 364 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 UBE2G2P60604 165 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 C5orf30Q96GV9 206 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 FAM234AQ9H0X4 552 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 PARLQ9H300 379 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 OBP2BQ9NPH6 170 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 KIR2DL5BA0A0G2JN68 375 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 KIR2DL5BA0A0G2JPC4 375 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 ODAMA1E959 279 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 H7BYZ3 331 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 SH2D1BO14796 132 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 GABRA2P47869 451 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 COL5A1-AS1Q5SY13 56 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 TMPRSS7Q7RTY8 843 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 KIR2DL5AQ8N109 375 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 PKIBQ9C010 78 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 NAT8Q9UHE5 227 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 HEATR1Q9H583 2144 aaKnown RBP16.22■□□□□ 0.19
CAPN1-226ENST00000533820 PSMB3P49720 205 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 PPP1CBP62140 327 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 RPL23P62829 140 aaKnown RBP16.22■□□□□ 0.19
CAPN1-226ENST00000533820 GCSAMLQ5JQS6 135 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 ZNF66Q6ZN08 573 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 SLC25A40Q8TBP6 338 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 PAM16Q9Y3D7 125 aa16.22■□□□□ 0.19
CAPN1-226ENST00000533820 A0A1W2PNU3 283 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-226ENST00000533820 C12orf77C9JDV5 145 aa16.21■□□□□ 0.19
CAPN1-226ENST00000533820 CHRNA7P36544 502 aa16.21■□□□□ 0.19
CAPN1-226ENST00000533820 GALR1P47211 349 aa16.21■□□□□ 0.19
CAPN1-226ENST00000533820 SELENOTP62341 195 aa16.21■□□□□ 0.19
CAPN1-226ENST00000533820 OR51G1Q8NGK1 321 aa16.21■□□□□ 0.19
CAPN1-226ENST00000533820 DCTN5Q9BTE1 182 aa16.21■□□□□ 0.19
CAPN1-226ENST00000533820 GSX1Q9H4S2 264 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-226ENST00000533820 KCNIP1Q9NZI2 227 aa16.21■□□□□ 0.19
CAPN1-226ENST00000533820 C1QTNF9BB2RNN3 333 aa16.21■□□□□ 0.19
CAPN1-226ENST00000533820 ATP6V1FQ16864 119 aa16.21■□□□□ 0.19
CAPN1-226ENST00000533820 TMEM18Q96B42 140 aa16.21■□□□□ 0.19
CAPN1-226ENST00000533820 PINX1Q96BK5 328 aaKnown RBP16.21■□□□□ 0.19
CAPN1-226ENST00000533820 TUBG2Q9NRH3 451 aa16.21■□□□□ 0.19
CAPN1-226ENST00000533820 TNRC6BQ9UPQ9 1833 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms