RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 DUTP33316 252 aaKnown RBP10.32□□□□□ -0.76
VPS28-211ENST00000530790 VMA21Q3ZAQ7 101 aa10.32□□□□□ -0.76
VPS28-211ENST00000530790 TIMM50Q3ZCQ8 353 aa10.32□□□□□ -0.76
VPS28-211ENST00000530790 TMEM177Q53S58 311 aa10.32□□□□□ -0.76
VPS28-211ENST00000530790 ZNF645Q8N7E2 425 aa10.32□□□□□ -0.76
VPS28-211ENST00000530790 SLC25A38Q96DW6 304 aa10.32□□□□□ -0.76
VPS28-211ENST00000530790 MS4A10Q96PG2 267 aa10.32□□□□□ -0.76
VPS28-211ENST00000530790 VCX3AQ9NNX9 186 aa10.32□□□□□ -0.76
VPS28-211ENST00000530790 ZNF355PQ9NSJ1 428 aa10.32□□□□□ -0.76
VPS28-211ENST00000530790 ANXA10Q9UJ72 324 aa10.32□□□□□ -0.76
VPS28-211ENST00000530790 LINC01619G3V211 115 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 OVOL1O14753 267 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 CRYZL1O95825 349 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 IGHV3-11P01762 117 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 TRGV3P03979 118 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 NFYAP23511 347 aaPredicted RBP10.31□□□□□ -0.76
VPS28-211ENST00000530790 ECI1P42126 302 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 INSL3P51460 131 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 CD69Q07108 199 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 CNIH2Q6PI25 160 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 KCTD9Q7L273 389 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 OR5H6Q8NGV6 325 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 DDB2Q92466 427 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 OR2W1Q9Y3N9 320 aa10.31□□□□□ -0.76
VPS28-211ENST00000530790 IGHV4OR15-8A0A075B7B6 117 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 A0A087WW49 117 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 A0A0A6YYH2 397 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 A6NJ64 397 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 LINC00473A8K010 186 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 H3BUA1 57 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 J3QRK9 145 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 SSX5O60225 188 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 SLC22A5O76082 557 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 CRYGBP07316 175 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 SLURP1P55000 103 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 ARPC4P59998 168 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 UBE2KP61086 200 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 SSBP2P81877 361 aaPredicted RBP10.3□□□□□ -0.76
VPS28-211ENST00000530790 PJVKQ0ZLH3 352 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 POC5Q8NA72 575 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 OSR1Q8TAX0 266 aaPredicted RBP10.3□□□□□ -0.76
VPS28-211ENST00000530790 DCUN1D4Q92564 292 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 TMEM68Q96MH6 324 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 PRR25Q96S07 402 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 PHB2Q99623 299 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 B9D2Q9BPU9 175 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 SCOCQ9UIL1 159 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 MRPS7Q9Y2R9 242 aaKnown RBP10.3□□□□□ -0.76
VPS28-211ENST00000530790 PRELID3BQ9Y3B1 194 aa10.3□□□□□ -0.76
VPS28-211ENST00000530790 TRAV18A0A075B6X5 111 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 C13orf42A0A1B0GVH6 325 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 CREBL2O60519 120 aaPredicted RBP10.29□□□□□ -0.76
VPS28-211ENST00000530790 TMEM127O75204 238 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 SAP30O75446 220 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 TUSC2O75896 110 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 TNFAIP8O95379 198 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 HLA-DQB1P01920 261 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 ZNF429Q86V71 674 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 CROCCP3Q8IVE0 287 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 TEX45Q8NA69 505 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 TSPAN14Q8NG11 270 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 DLX4Q92988 240 aaPredicted RBP10.29□□□□□ -0.76
VPS28-211ENST00000530790 DIABLOQ9NR28 239 aa10.29□□□□□ -0.76
VPS28-211ENST00000530790 ZNF256Q9Y2P7 627 aaPredicted RBP10.29□□□□□ -0.76
VPS28-211ENST00000530790 RBMX2Q9Y388 322 aaKnown RBP10.29□□□□□ -0.76
VPS28-211ENST00000530790 A0A087WXM4 84 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 IGKV1D-13A0A0B4J2D9 117 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 A0A0G2JLM5 398 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 SRRM4A7MD48 611 aaKnown RBP10.28□□□□□ -0.76
VPS28-211ENST00000530790 AIREO43918 545 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 FCGR3BO75015 233 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 LY86O95711 162 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 HSPB1P04792 205 aaKnown RBP10.28□□□□□ -0.76
VPS28-211ENST00000530790 SAA1P0DJI8 122 aaPredicted RBP10.28□□□□□ -0.76
VPS28-211ENST00000530790 IGKV1-13P0DP09 117 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 TNXAQ16473 311 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 OR2B11Q5JQS5 317 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 IDO2Q6ZQW0 420 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 OVCH2Q7RTZ1 564 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 BEST4Q8NFU0 473 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 OR5T1Q8NG75 326 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 ACOT12Q8WYK0 555 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 RHOVQ96L33 236 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 HSD17B10Q99714 261 aaKnown RBP10.28□□□□□ -0.76
VPS28-211ENST00000530790 DCUN1D5Q9BTE7 237 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 SPATA2Q9UM82 520 aa10.28□□□□□ -0.76
VPS28-211ENST00000530790 MPPED1O15442 326 aa10.27□□□□□ -0.77
VPS28-211ENST00000530790 ACTL6BO94805 426 aa10.27□□□□□ -0.77
VPS28-211ENST00000530790 CDK10Q15131 360 aa10.27□□□□□ -0.77
VPS28-211ENST00000530790 PRSS8Q16651 343 aa10.27□□□□□ -0.77
VPS28-211ENST00000530790 GVQW1Q8N7I0 195 aa10.27□□□□□ -0.77
VPS28-211ENST00000530790 OR4S2Q8NH73 311 aa10.27□□□□□ -0.77
VPS28-211ENST00000530790 TCTEX1D2Q8WW35 142 aa10.27□□□□□ -0.77
VPS28-211ENST00000530790 SRSF12Q8WXF0 261 aaKnown RBP10.27□□□□□ -0.77
VPS28-211ENST00000530790 AUNIPQ9H7T9 357 aa10.27□□□□□ -0.77
VPS28-211ENST00000530790 COA4Q9NYJ1 87 aa10.27□□□□□ -0.77
VPS28-211ENST00000530790 IGLV2-14P01704 120 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 APELAP0DMC3 54 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 AADACP22760 399 aa10.26□□□□□ -0.77
VPS28-211ENST00000530790 TGFBR1P36897 503 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 210.7 ms