RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 IGKV1-6A0A0C4DH72 117 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 DUXBA0A1W2PPF3 345 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 A0A1W2PRD5 423 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 A0A1W2PRF3 423 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 A0A1W2PRM7 423 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 H0Y980 276 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 TRIM77I1YAP6 450 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 TIMM23O14925 209 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 SHOXO15266 292 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 MPPED1O15442 326 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 RBFOX2O43251 390 aaKnown RBP eCLIP3.87□□□□□ -1.79
SSBP3-213ENST00000530618 PEX14O75381 377 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 RBMXL2O75526 392 aaKnown RBP3.87□□□□□ -1.79
SSBP3-213ENST00000530618 MMP23AO75900 390 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 TSPAN9O75954 239 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 SNAPC5O75971 98 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 HPRT1P00492 218 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 IGHV3-7P01780 117 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 TCRBP04435 133 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 H2AFB2P0C5Z0 115 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 IGHV4-38-2P0DP08 117 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 AKR1C4P17516 323 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 F2RP25116 425 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 SLC6A1P30531 599 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 GNRHRP30968 328 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 AKR1C2P52895 323 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 RAG2P55895 527 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 RPS16P62249 146 aaKnown RBP3.87□□□□□ -1.79
SSBP3-213ENST00000530618 BAMBIQ13145 260 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 PHLDA2Q53GA4 152 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 KIAA2026Q5HYC2 2103 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 KLF17Q5JT82 389 aaPredicted RBP3.87□□□□□ -1.79
SSBP3-213ENST00000530618 THOC7Q6I9Y2 204 aaKnown RBP3.87□□□□□ -1.79
SSBP3-213ENST00000530618 BRD3OSQ6XYD6 125 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 LHFPL1Q86WI0 220 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 LDLRAD3Q86YD5 345 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 THNSL2Q86YJ6 484 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 FAM219AQ8IW50 185 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 LGI3Q8N145 548 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 C11orf42Q8N5U0 333 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 DRAM1Q8N682 238 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 ZNF439Q8NDP4 499 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 DMBX1Q8NFW5 382 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 OR13C8Q8NGS7 320 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 OR51H1Q8NH63 302 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 OR4A5Q8NH83 315 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 MARCH1Q8TCQ1 289 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 ABHD14BQ96IU4 210 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 HARBI1Q96MB7 349 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 ZNF48Q96MX3 618 aaPredicted RBP3.87□□□□□ -1.79
SSBP3-213ENST00000530618 SPIN2AQ99865 258 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 SSX3Q99909 188 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 RASL11BQ9BPW5 248 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 SPIN2BQ9BPZ2 258 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 NPFFR1Q9GZQ6 430 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 C20orf85Q9H1P6 137 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 MEGF9Q9H1U4 602 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 NAA60Q9H7X0 242 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 SLC2A9Q9NRM0 540 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 NUDT15Q9NV35 164 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 SDHAF2Q9NX18 166 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 FKBP11Q9NYL4 201 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 RNF150Q9ULK6 438 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 MOB4Q9Y3A3 225 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 NBEAL2Q6ZNJ1 2754 aa3.87□□□□□ -1.79
SSBP3-213ENST00000530618 PLECQ15149 4684 aaKnown RBP3.86□□□□□ -1.79
SSBP3-213ENST00000530618 NOTCH3Q9UM47 2321 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 IGHV3OR16-10A0A075B7F0 116 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 IGKV1D-8A0A087WSZ0 117 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 A0A0U1RQK1 487 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 C3orf85A0A1B0GTC6 90 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 A0A1W2PPE3 182 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 CRYM-AS1A6NIL9 109 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 NCBP2LA6PVI3 153 aaKnown RBP3.86□□□□□ -1.79
SSBP3-213ENST00000530618 H0YJW9 148 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 ARPC1BO15143 372 aaKnown RBP3.86□□□□□ -1.79
SSBP3-213ENST00000530618 TNFSF12O43508 249 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 FCGR3BO75015 233 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 PGLYRP1O75594 196 aaPredicted RBP3.86□□□□□ -1.79
SSBP3-213ENST00000530618 FCN3O75636 299 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 OR2F2O95006 317 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 LY86O95711 162 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 IGKV1D-33P01593 117 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 IGKV1-33P01594 117 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 HLA-AP01891 365 aaKnown RBP3.86□□□□□ -1.79
SSBP3-213ENST00000530618 FGF2P09038 288 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 NQO2P16083 231 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 DUTP33316 252 aaKnown RBP3.86□□□□□ -1.79
SSBP3-213ENST00000530618 REG1BP48304 166 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 UBA52P62987 128 aaKnown RBP3.86□□□□□ -1.79
SSBP3-213ENST00000530618 MMDQ15546 238 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 AWAT1Q58HT5 328 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 RPL39P5Q59GN2 51 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 PRR31Q5SQ13 230 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 DMRTA1Q5VZB9 504 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 RUSC1-AS1Q66K80 236 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 FAAP20Q6NZ36 180 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 C12orf54Q6X4T0 127 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 Q6YL49 198 aa3.86□□□□□ -1.79
SSBP3-213ENST00000530618 ZNF818PQ6ZRF7 136 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms