RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 MYOZ3Q8TDC0 251 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 ADTRPQ96IZ2 230 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 DIABLOQ9NR28 239 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 ANXA10Q9UJ72 324 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 OR2W1Q9Y3N9 320 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 LINC00473A8K010 186 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 SEC14L6B5MCN3 397 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 I3L521 148 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 ARPC1BO15143 372 aaKnown RBP12.07□□□□□ -0.48
CAPN1-213ENST00000527897 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 IGHV3-11P01762 117 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 RRASP10301 218 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 PTHLHP12272 177 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 DUTP33316 252 aaKnown RBP12.07□□□□□ -0.48
CAPN1-213ENST00000527897 TPPP2P59282 170 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 TAGLNQ01995 201 aaKnown RBP12.07□□□□□ -0.48
CAPN1-213ENST00000527897 ZNF616Q08AN1 781 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 C19orf54Q5BKX5 351 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 ZNF645Q8N7E2 425 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 BEST4Q8NFU0 473 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 YIPF6Q96EC8 236 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 SPATA2Q9UM82 520 aa12.07□□□□□ -0.48
CAPN1-213ENST00000527897 IGKV1D-13A0A0B4J2D9 117 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 MEIS3P1A6NDR6 274 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 FCGR3BO75015 233 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 OR8U8P0C7N1 319 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 APELAP0DMC3 54 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 IGKV1-13P0DP09 117 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 RPS19P39019 145 aaKnown RBP12.06□□□□□ -0.48
CAPN1-213ENST00000527897 EGFEM1PQ0D2K5 195 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 VMA21Q3ZAQ7 101 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 AKIRIN2Q53H80 203 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 TMEM177Q53S58 311 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 PYHIN1Q6K0P9 492 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 IDO2Q6ZQW0 420 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 KCTD9Q7L273 389 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 CROCCP3Q8IVE0 287 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 OR5T1Q8NG75 326 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 PHB2Q99623 299 aa12.06□□□□□ -0.48
CAPN1-213ENST00000527897 A0A0A6YYH2 397 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 A6NJ64 397 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 SRRM4A7MD48 611 aaKnown RBP12.05□□□□□ -0.48
CAPN1-213ENST00000527897 HLA-DQB1P01920 261 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 TRGV3P03979 118 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 DGCR2P98153 550 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 FHL3Q13643 280 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 C9orf66Q5T8R8 295 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 SECTM1Q8WVN6 248 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 TCTEX1D2Q8WW35 142 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 ACOT12Q8WYK0 555 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 DDB2Q92466 427 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 AUNIPQ9H7T9 357 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 RBMX2Q9Y388 322 aaKnown RBP12.05□□□□□ -0.48
CAPN1-213ENST00000527897 PRELID3BQ9Y3B1 194 aa12.05□□□□□ -0.48
CAPN1-213ENST00000527897 CRYGBP07316 175 aa12.04□□□□□ -0.48
CAPN1-213ENST00000527897 FCGR2CP31995 323 aa12.04□□□□□ -0.48
CAPN1-213ENST00000527897 SLURP1P55000 103 aa12.04□□□□□ -0.48
CAPN1-213ENST00000527897 RUNX1Q01196 453 aa12.04□□□□□ -0.48
CAPN1-213ENST00000527897 TNXAQ16473 311 aa12.04□□□□□ -0.48
CAPN1-213ENST00000527897 ASPHD1Q5U4P2 390 aa12.04□□□□□ -0.48
CAPN1-213ENST00000527897 SAMD12Q8N8I0 201 aa12.04□□□□□ -0.48
CAPN1-213ENST00000527897 S100A16Q96FQ6 103 aaKnown RBP12.04□□□□□ -0.48
CAPN1-213ENST00000527897 GPHA2Q96T91 129 aa12.04□□□□□ -0.48
CAPN1-213ENST00000527897 IFT46Q9NQC8 304 aa12.04□□□□□ -0.48
CAPN1-213ENST00000527897 TAS2R8Q9NYW2 309 aa12.04□□□□□ -0.48
CAPN1-213ENST00000527897 MRPS7Q9Y2R9 242 aaKnown RBP12.04□□□□□ -0.48
CAPN1-213ENST00000527897 IGHV4OR15-8A0A075B7B6 117 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 A0A087WW49 117 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 LINC01619G3V211 115 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 TNFSF12O43508 249 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 SLC22A5O76082 557 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 LGALS1P09382 135 aaKnown RBP12.03□□□□□ -0.48
CAPN1-213ENST00000527897 AADACP22760 399 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 ECI1P42126 302 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 FXYD4P59646 89 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 UBE2KP61086 200 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 NCS1P62166 190 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 RPL30P62888 115 aaKnown RBP12.03□□□□□ -0.48
CAPN1-213ENST00000527897 SSBP2P81877 361 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-213ENST00000527897 DEFA5Q01523 94 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 UBE2NLQ5JXB2 153 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 TMEM69Q5SWH9 247 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 HOGA1Q86XE5 327 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 POC5Q8NA72 575 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 OSR1Q8TAX0 266 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-213ENST00000527897 DCUN1D4Q92564 292 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 FUNDC2Q9BWH2 189 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 SLA2Q9H6Q3 261 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 COA4Q9NYJ1 87 aa12.03□□□□□ -0.48
CAPN1-213ENST00000527897 ZMAT5Q9UDW3 170 aaKnown RBP12.03□□□□□ -0.48
CAPN1-213ENST00000527897 C13orf42A0A1B0GVH6 325 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 OVOL1O14753 267 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 MPPED1O15442 326 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 XRCC3O43542 346 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 TMEM127O75204 238 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 ACTL6BO94805 426 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 LY86O95711 162 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 SAA1P0DJI8 122 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-213ENST00000527897 CBX5P45973 191 aa12.02□□□□□ -0.49
CAPN1-213ENST00000527897 VBP1P61758 197 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms