RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 TRANK1O15050 2925 aa2.28□□□□□ -2.05
CD44-223ENST00000526553 RIF1Q5UIP0 2472 aaKnown RBP2.27□□□□□ -2.05
CD44-223ENST00000526553 CHD9Q3L8U1 2897 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 XIRP2A4UGR9 3374 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 ARGFXA6NJG6 315 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 ZNF729A6NN14 1252 aaPredicted RBP2.27□□□□□ -2.05
CD44-223ENST00000526553 F5H5T6 163 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 H3BQ85 93 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 DEXIO95424 95 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 LTAP01374 205 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 GYPCP04921 128 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 GUSBP08236 651 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 GABRA1P14867 456 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 PSMA1P25786 263 aaKnown RBP2.27□□□□□ -2.05
CD44-223ENST00000526553 CD34P28906 385 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 ADORA1P30542 326 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 GTF2A1P52655 376 aaPredicted RBP2.27□□□□□ -2.05
CD44-223ENST00000526553 DAD1P61803 113 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 RPS11P62280 158 aaKnown RBP eCLIP2.27□□□□□ -2.05
CD44-223ENST00000526553 C1DQ13901 141 aaKnown RBP2.27□□□□□ -2.05
CD44-223ENST00000526553 LDLRAD2Q5SZI1 272 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 LAIR2Q6ISS4 152 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 LYZL2Q7Z4W2 148 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 FAM19A5Q7Z5A7 132 aaPredicted RBP2.27□□□□□ -2.05
CD44-223ENST00000526553 DEFB128Q7Z7B8 93 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 KRTCAP2Q8N6L1 136 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 C1orf64Q8NEQ6 169 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 OR9I1Q8NGQ6 314 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 OR51H1Q8NH63 302 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 KCTD4Q8WVF5 259 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 MAL2Q969L2 176 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 PACRGQ96M98 296 aaPredicted RBP2.27□□□□□ -2.05
CD44-223ENST00000526553 OR2V2Q96R30 315 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 B9D2Q9BPU9 175 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 SPZ1Q9BXG8 430 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 PLA2G12AQ9BZM1 189 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 GABARAPL1Q9H0R8 117 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 FAM206AQ9NX38 181 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 ZNF586Q9NXT0 402 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 ZFHX2Q9C0A1 2572 aaPredicted RBP2.27□□□□□ -2.05
CD44-223ENST00000526553 MYH7P12883 1935 aa2.27□□□□□ -2.05
CD44-223ENST00000526553 C5orf42Q9H799 3197 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 CFAP54Q96N23 3096 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 TECTAO75443 2155 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 MICAL3Q7RTP6 2002 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 IGKV1OR2-108A0A075B7D4 117 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 METTL15A6NJ78 407 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 D6RAR5 112 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 K7EM74 188 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 BIRC5O15392 142 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 DENRO43583 198 aaKnown RBP2.26□□□□□ -2.05
CD44-223ENST00000526553 ARL6IP5O75915 188 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 IGHV3-53P01767 116 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 LINC00614P0C842 121 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 C8orf88P0DMB2 117 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 INAFM2P0DMQ5 153 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 PSKH1P11801 424 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 IL9P15248 144 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 GRPRP30550 384 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 COILP38432 576 aaPredicted RBP2.26□□□□□ -2.05
CD44-223ENST00000526553 DYNLL1P63167 89 aaKnown RBP2.26□□□□□ -2.05
CD44-223ENST00000526553 IGFBP7Q16270 282 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 BCL2A1Q16548 175 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 C4orf26Q17RF5 130 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 OGFRL1Q5TC84 451 aaPredicted RBP2.26□□□□□ -2.05
CD44-223ENST00000526553 TMEM136Q6ZRR5 245 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 NATD1Q8N6N6 113 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 TNFAIP8L1Q8WVP5 186 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 CYGBQ8WWM9 190 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 KCTD7Q96MP8 289 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 ARL6Q9H0F7 186 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 NSRP1Q9H0G5 558 aaKnown RBP2.26□□□□□ -2.05
CD44-223ENST00000526553 ALX4Q9H161 411 aaPredicted RBP2.26□□□□□ -2.05
CD44-223ENST00000526553 OR51B6Q9H340 312 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 CENPHQ9H3R5 247 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 TRIOO75962 3097 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 TRIP11Q15643 1979 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 MYH6P13533 1939 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 ATG2AQ2TAZ0 1938 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 TICRRQ7Z2Z1 1910 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 PLXNA3P51805 1871 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 KMT2EQ8IZD2 1858 aa2.26□□□□□ -2.05
CD44-223ENST00000526553 TPRP12270 2363 aaKnown RBP2.25□□□□□ -2.05
CD44-223ENST00000526553 RFX7Q2KHR2 1363 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 TANC1Q9C0D5 1861 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 TINCRA0A1B0GVN0 87 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 A8MWP4 228 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 B4DEV8 164 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 F5H768 121 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 COPEO14579 308 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 ASS1P00966 412 aaKnown RBP2.25□□□□□ -2.05
CD44-223ENST00000526553 IGKV1D-33P01593 117 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 IGKV1-33P01594 117 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 HBZP02008 142 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 TRGV3P03979 118 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 IGKV4-1P06312 121 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 COX5BP10606 129 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 UGT2B7P16662 529 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 S100A2P29034 98 aa2.25□□□□□ -2.05
CD44-223ENST00000526553 CDC34P49427 236 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms