RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 ABRACLQ9P1F3 81 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 OR1A1Q9P1Q5 309 aa10.86□□□□□ -0.67
CPSF1-201ENST00000526271 A0A0B4J203 849 aa10.85□□□□□ -0.67
CPSF1-201ENST00000526271 TMEM272A0A1B0GTI8 110 aa10.85□□□□□ -0.67
CPSF1-201ENST00000526271 ZNF182P17025 639 aaPredicted RBP10.85□□□□□ -0.67
CPSF1-201ENST00000526271 MECP2P51608 486 aaKnown RBP10.85□□□□□ -0.67
CPSF1-201ENST00000526271 RPS27AP62979 156 aaKnown RBP10.85□□□□□ -0.67
CPSF1-201ENST00000526271 ACTBL2Q562R1 376 aa10.85□□□□□ -0.67
CPSF1-201ENST00000526271 FAM71F2Q6NXP2 309 aa10.85□□□□□ -0.67
CPSF1-201ENST00000526271 TCTEX1D1Q8N7M0 179 aa10.85□□□□□ -0.67
CPSF1-201ENST00000526271 DRAXINQ8NBI3 349 aaPredicted RBP10.85□□□□□ -0.67
CPSF1-201ENST00000526271 KCTD12Q96CX2 325 aaKnown RBP10.85□□□□□ -0.67
CPSF1-201ENST00000526271 C5orf30Q96GV9 206 aa10.85□□□□□ -0.67
CPSF1-201ENST00000526271 OR4C12Q96R67 309 aa10.85□□□□□ -0.67
CPSF1-201ENST00000526271 HDHD3Q9BSH5 251 aaPredicted RBP10.85□□□□□ -0.67
CPSF1-201ENST00000526271 TM2D1Q9BX74 207 aa10.85□□□□□ -0.67
CPSF1-201ENST00000526271 SLC23A1Q9UHI7 598 aa10.85□□□□□ -0.67
CPSF1-201ENST00000526271 RAB22AQ9UL26 194 aa10.85□□□□□ -0.67
CPSF1-201ENST00000526271 IGKV1-6A0A0C4DH72 117 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 IGLV2-23P01705 113 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 CRYGBP07316 175 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 CSN3P07498 182 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 RAB6AP20340 208 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 PJVKQ0ZLH3 352 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 PLA2G7Q13093 441 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 ZNF562Q6V9R5 426 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 FAM89BQ8N5H3 189 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 OR2AK2Q8NG84 335 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 GALMQ96C23 342 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 FAM110AQ9BQ89 295 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 C11orf54Q9H0W9 315 aaPredicted RBP10.84□□□□□ -0.67
CPSF1-201ENST00000526271 LPAR5Q9H1C0 372 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 SPATA2Q9UM82 520 aa10.84□□□□□ -0.67
CPSF1-201ENST00000526271 OR5H14A6NHG9 310 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 FOXI3A8MTJ6 420 aaPredicted RBP10.83□□□□□ -0.68
CPSF1-201ENST00000526271 TRGV3P03979 118 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 EDN2P20800 178 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 OR5T1Q8NG75 326 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 OR5H6Q8NGV6 325 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 IL1F10Q8WWZ1 152 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 ACOT12Q8WYK0 555 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 FLYWCH2Q96CP2 140 aaKnown RBP10.83□□□□□ -0.68
CPSF1-201ENST00000526271 SPATA25Q9BR10 227 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 RSRP1Q9BUV0 290 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 TMEM59Q9BXS4 323 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 GHITMQ9H3K2 345 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 KCNIP1Q9NZI2 227 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 CCDC59Q9P031 241 aaKnown RBP10.83□□□□□ -0.68
CPSF1-201ENST00000526271 METTL1Q9UBP6 276 aaKnown RBP10.83□□□□□ -0.68
CPSF1-201ENST00000526271 ETV7Q9Y603 341 aa10.83□□□□□ -0.68
CPSF1-201ENST00000526271 ANKRD34BA5PLL1 514 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 RAB29O14966 203 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 RGS11O94810 467 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 DYRK1AQ13627 763 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 POC5Q8NA72 575 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 OR9G4Q8NGQ1 327 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 LGALS14Q8TCE9 139 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 ABHD5Q8WTS1 349 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 CMTM3Q96MX0 182 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 URM1Q9BTM9 101 aaKnown RBP10.82□□□□□ -0.68
CPSF1-201ENST00000526271 SLIRPQ9GZT3 109 aaKnown RBP10.82□□□□□ -0.68
CPSF1-201ENST00000526271 NXF2Q9GZY0 626 aaKnown RBP10.82□□□□□ -0.68
CPSF1-201ENST00000526271 HIPK2Q9H2X6 1198 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 PIPOXQ9P0Z9 390 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 RNF150Q9ULK6 438 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 WASHC3Q9Y3C0 194 aa10.82□□□□□ -0.68
CPSF1-201ENST00000526271 A0A075B6Q4 140 aa10.81□□□□□ -0.68
CPSF1-201ENST00000526271 SRRM4A7MD48 611 aaKnown RBP10.81□□□□□ -0.68
CPSF1-201ENST00000526271 ITGB1BP1O14713 200 aa10.81□□□□□ -0.68
CPSF1-201ENST00000526271 SCTP09683 121 aa10.81□□□□□ -0.68
CPSF1-201ENST00000526271 TMEM50BP56557 158 aa10.81□□□□□ -0.68
CPSF1-201ENST00000526271 SYNJ2BPP57105 145 aa10.81□□□□□ -0.68
CPSF1-201ENST00000526271 PYHIN1Q6K0P9 492 aa10.81□□□□□ -0.68
CPSF1-201ENST00000526271 GRPEL2Q8TAA5 225 aa10.81□□□□□ -0.68
CPSF1-201ENST00000526271 AP3S1Q92572 193 aa10.81□□□□□ -0.68
CPSF1-201ENST00000526271 WFDC10AQ9H1F0 79 aa10.81□□□□□ -0.68
CPSF1-201ENST00000526271 SLA2Q9H6Q3 261 aa10.81□□□□□ -0.68
CPSF1-201ENST00000526271 TRBV6-6A0A0A6YYG2 114 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 RBMY1BA6NDE4 496 aaKnown RBP10.8□□□□□ -0.68
CPSF1-201ENST00000526271 METTL21EPA6NDL7 271 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 RBMY1EA6NEQ0 496 aaKnown RBP10.8□□□□□ -0.68
CPSF1-201ENST00000526271 RAB27BO00194 218 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 SOCS1O15524 211 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 SLC25A17O43808 307 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 GSTP1P09211 210 aaKnown RBP10.8□□□□□ -0.68
CPSF1-201ENST00000526271 RBMY1DP0C7P1 496 aaKnown RBP10.8□□□□□ -0.68
CPSF1-201ENST00000526271 TMEM267Q0VDI3 215 aaPredicted RBP10.8□□□□□ -0.68
CPSF1-201ENST00000526271 FXYD3Q14802 87 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 PLGLAQ15195 96 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 MZT2AQ6P582 158 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 SGPP2Q8IWX5 399 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 SLC25A38Q96DW6 304 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 RNF5Q99942 180 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 RANGRFQ9HD47 186 aaPredicted RBP10.8□□□□□ -0.68
CPSF1-201ENST00000526271 COMMD3Q9UBI1 195 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 AK3Q9UIJ7 227 aa10.8□□□□□ -0.68
CPSF1-201ENST00000526271 ZNF785A8K8V0 405 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 H7C2Y5 167 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 RBBP9O75884 186 aa10.79□□□□□ -0.68
CPSF1-201ENST00000526271 MOGAT2Q3SYC2 334 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms