RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 A0A1W2PQD3 144 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 RFPL4AA6NLU0 287 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 RFPL4AL1F8VTS6 287 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 YEATS4O95619 227 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 CD24P25063 80 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 CA7P43166 264 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 IDH3GP51553 393 aaPredicted RBP1.1□□□□□ -2.23
CD44-215ENST00000525241 MAP3K7CLP57077 242 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 RELAQ04206 551 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 TMEM267Q0VDI3 215 aaPredicted RBP1.1□□□□□ -2.23
CD44-215ENST00000525241 ZNF791Q3KP31 576 aaPredicted RBP1.1□□□□□ -2.23
CD44-215ENST00000525241 HSP90B2PQ58FF3 399 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 LCN8Q6JVE9 175 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 FAM19A5Q7Z5A7 132 aaPredicted RBP1.1□□□□□ -2.23
CD44-215ENST00000525241 OR5J2Q8NH18 312 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 STOML3Q8TAV4 291 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.1□□□□□ -2.23
CD44-215ENST00000525241 DISP1Q96F81 1524 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 NAV3Q8IVL0 2385 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 ZFHX2Q9C0A1 2572 aaPredicted RBP1.09□□□□□ -2.23
CD44-215ENST00000525241 PTPRSQ13332 1948 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 KIAA2026Q5HYC2 2103 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 TRGV5A0A0B4J1U4 118 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 GOLGA6L10A6NI86 522 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 COPEO14579 308 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 GSTZ1O43708 216 aaPredicted RBP1.09□□□□□ -2.23
CD44-215ENST00000525241 NDUFB2O95178 105 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 ZNF705DP0CH99 300 aaPredicted RBP1.09□□□□□ -2.23
CD44-215ENST00000525241 ZNF705BP0CI00 300 aaPredicted RBP1.09□□□□□ -2.23
CD44-215ENST00000525241 HIST1H1CP16403 213 aaKnown RBP1.09□□□□□ -2.23
CD44-215ENST00000525241 CFL1P23528 166 aaKnown RBP1.09□□□□□ -2.23
CD44-215ENST00000525241 MAGEA12P43365 314 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 CLEC12BQ2HXU8 276 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 FUNDC1Q8IVP5 155 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 ATP6V1C2Q8NEY4 427 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 RPS4Y2Q8TD47 263 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 ASB17Q8WXJ9 295 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 PPCDCQ96CD2 204 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 TLCD1Q96CP7 247 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 HDHD2Q9H0R4 259 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 BABAM2Q9NXR7 383 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 HHLA3Q9XRX5 114 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 ATP6V1DQ9Y5K8 247 aa1.09□□□□□ -2.23
CD44-215ENST00000525241 HEATR5AQ86XA9 2040 aa1.09□□□□□ -2.24
CD44-215ENST00000525241 SIPA1L1O43166 1804 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 TINCRA0A1B0GVN0 87 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 F5H768 121 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 UBE2L6O14933 153 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 BIRC5O15392 142 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 ATP8B1O43520 1251 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 BPGMP07738 259 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 MIPP30301 263 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 H2BFSP57053 126 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 TAS2R30P59541 319 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 SLC38A11Q08AI6 406 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 SDHAF4Q5VUM1 108 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 DNM1P34Q6PK57 102 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 PLEKHG7Q6ZR37 379 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 SPATA12Q7Z6I5 190 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 SLC35E3Q7Z769 313 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 LRRC28Q86X40 367 aaPredicted RBP1.08□□□□□ -2.24
CD44-215ENST00000525241 C1orf174Q8IYL3 243 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 SMCR5Q8TEV8 140 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 SMIM19Q96E16 107 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 C7orf50Q9BRJ6 194 aaKnown RBP1.08□□□□□ -2.24
CD44-215ENST00000525241 NDEL1Q9GZM8 345 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 SLC22A4Q9H015 551 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 ASH1LQ9NR48 2969 aaKnown RBP1.08□□□□□ -2.24
CD44-215ENST00000525241 PLEKHJ1Q9NW61 149 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 MED13Q9UHV7 2174 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 PTPRBP23467 1997 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 WDFY4Q6ZS81 3184 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 MYO9AB2RTY4 2548 aa1.08□□□□□ -2.24
CD44-215ENST00000525241 SPTBN4Q9H254 2564 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 C1orf232A0A0U1RR37 186 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 METTL15A6NJ78 407 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 BHLHE40O14503 412 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 HPGDSO60760 199 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 C1QCP02747 245 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 ATP5G1P05496 136 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 UCHL1P09936 223 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 OCMP0CE72 109 aaPredicted RBP1.07□□□□□ -2.24
CD44-215ENST00000525241 C8orf88P0DMB2 117 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 COX5BP10606 129 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 F8A1P23610 371 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 CD40LGP29965 261 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 GRPRP30550 384 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 RBM11P57052 281 aaKnown RBP1.07□□□□□ -2.24
CD44-215ENST00000525241 MED21Q13503 144 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 HLA-DRB5Q30154 266 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 LGALS9BQ3B8N2 356 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 DAND5Q8N907 189 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 HAVCR2Q8TDQ0 301 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 SLC37A2Q8TED4 501 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 ASB13Q8WXK3 278 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 RNASE6Q93091 150 aaKnown RBP1.07□□□□□ -2.24
CD44-215ENST00000525241 CPNE2Q96FN4 548 aaPredicted RBP1.07□□□□□ -2.24
CD44-215ENST00000525241 RBP7Q96R05 134 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 RETNLBQ9BQ08 111 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 HSPB9Q9BQS6 159 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms