RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 RBFOX2O43251 390 aaKnown RBP eCLIP17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 IFNA21P01568 189 aa17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 IGKV1-39P01597 117 aa17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 IGKV1D-39P04432 117 aa17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 RPA2P15927 270 aa17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 PAX6P26367 422 aa17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 TAGLNQ01995 201 aaKnown RBP17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 GGNBP1Q5YKI7 109 aa17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 AKAP14Q86UN6 197 aa17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 PIP4P2Q8N4L2 257 aa17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 CHIAQ9BZP6 476 aa17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 OTOGQ6ZRI0 2925 aa17.27■□□□□ 0.36
R3HCC1-208ENST00000522012 ABCA2Q9BZC7 2435 aa17.27■□□□□ 0.35
R3HCC1-208ENST00000522012 C5orf51A6NDU8 294 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 CCNKO75909 580 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 CRYZL1O95825 349 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 HPRT1P00492 218 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 RRASP10301 218 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 RIPPLY3P57055 190 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 BRD3OSQ6XYD6 125 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 RNASE11Q8TAA1 199 aaKnown RBP17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 MALSU1Q96EH3 234 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 VPS13CQ709C8 3753 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 PIGBOS1A0A0B4J2F0 54 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 A0A1W2PPI3 338 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 KRASP01116 189 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 HLA-GP17693 338 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 MC5RP33032 325 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 KLF17Q5JT82 389 aaPredicted RBP17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 GSG1LQ6UXU4 331 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 OR8H3Q8N146 312 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 DYNAPQ8N1N2 210 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 OR5M8Q8NGP6 311 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 ZNF436Q9C0F3 470 aaPredicted RBP17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 PLEKHA2Q9HB19 425 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 WASHC3Q9Y3C0 194 aa17.26■□□□□ 0.35
R3HCC1-208ENST00000522012 OOSP1A8MZH6 123 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 TIMM23O14925 209 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 ATG12O94817 140 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 G6PCP35575 357 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 AKR1C2P52895 323 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 H2BFSP57053 126 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 DHRS7BQ6IAN0 325 aaPredicted RBP17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 CCDC144NLQ6NUI1 221 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 AJUBAQ96IF1 538 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 SEC22AQ96IW7 307 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 NEURL2Q9BR09 285 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 PDCD10Q9BUL8 212 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 TMED3Q9Y3Q3 217 aa17.25■□□□□ 0.35
R3HCC1-208ENST00000522012 DUXBA0A1W2PPF3 345 aa17.24■□□□□ 0.35
R3HCC1-208ENST00000522012 MPTX1A8MV57 137 aa17.24■□□□□ 0.35
R3HCC1-208ENST00000522012 IGKV1-16P04430 117 aa17.24■□□□□ 0.35
R3HCC1-208ENST00000522012 RAB13P51153 203 aa17.24■□□□□ 0.35
R3HCC1-208ENST00000522012 PDPNQ86YL7 162 aa17.24■□□□□ 0.35
R3HCC1-208ENST00000522012 FLYWCH2Q96CP2 140 aaKnown RBP17.24■□□□□ 0.35
R3HCC1-208ENST00000522012 R3HDM4Q96D70 268 aa17.24■□□□□ 0.35
R3HCC1-208ENST00000522012 RRNAD1Q96FB5 475 aaKnown RBP17.24■□□□□ 0.35
R3HCC1-208ENST00000522012 RANGRFQ9HD47 186 aaPredicted RBP17.24■□□□□ 0.35
R3HCC1-208ENST00000522012 IGKV1-5P01602 117 aa17.23■□□□□ 0.35
R3HCC1-208ENST00000522012 VDAC1P21796 283 aa17.23■□□□□ 0.35
R3HCC1-208ENST00000522012 OR10C1Q96KK4 312 aa17.23■□□□□ 0.35
R3HCC1-208ENST00000522012 COMMD9Q9P000 198 aa17.23■□□□□ 0.35
R3HCC1-208ENST00000522012 CR1P17927 2039 aa17.23■□□□□ 0.35
R3HCC1-208ENST00000522012 ERVK-16P61578 105 aa17.22■□□□□ 0.35
R3HCC1-208ENST00000522012 RPS16P62249 146 aaKnown RBP17.22■□□□□ 0.35
R3HCC1-208ENST00000522012 SSX9Q7RTT3 188 aa17.22■□□□□ 0.35
R3HCC1-208ENST00000522012 DMBX1Q8NFW5 382 aa17.22■□□□□ 0.35
R3HCC1-208ENST00000522012 WDR89Q96FK6 387 aaPredicted RBP17.22■□□□□ 0.35
R3HCC1-208ENST00000522012 ST6GAL2Q96JF0 529 aa17.22■□□□□ 0.35
R3HCC1-208ENST00000522012 A0A0G2JRQ6 117 aa17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 SHOXO15266 292 aa17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 NQO2P16083 231 aa17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 ARHGDIBP52566 201 aa17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 CD300CQ08708 224 aa17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 IAH1Q2TAA2 248 aaPredicted RBP17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 VKORC1L1Q8N0U8 176 aa17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 OR4C13Q8NGP0 309 aa17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 NANPQ8TBE9 248 aa17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 LSM10Q969L4 123 aaKnown RBP17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 GPR146Q96CH1 333 aa17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 GSKIPQ9P0R6 139 aa17.21■□□□□ 0.35
R3HCC1-208ENST00000522012 A0A0U1RQK1 487 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 MARCH11A6NNE9 402 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 OR2A4O95047 310 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 HRASP01112 189 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 GIPP09681 153 aaPredicted RBP17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 CD1BP29016 333 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 IZUMO4Q1ZYL8 232 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 TMEM177Q53S58 311 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 NMSQ5H8A3 153 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 H2BFWTQ7Z2G1 175 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 OSR1Q8TAX0 266 aaPredicted RBP17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 CFHR4Q92496 578 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 C2orf50Q96LR7 162 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 HARBI1Q96MB7 349 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 FYTTD1Q96QD9 318 aaKnown RBP17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 OR2A7Q96R45 310 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 FAM96BQ9Y3D0 163 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 MMP24Q9Y5R2 645 aa17.21■□□□□ 0.34
R3HCC1-208ENST00000522012 SOX21Q9Y651 276 aaPredicted RBP17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms