RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 PRELID3BQ9Y3B1 194 aa9.38□□□□□ -0.91
HPS4-218ENST00000519774 V9GYH0 126 aa9.38□□□□□ -0.91
HPS4-218ENST00000519774 LINC01548A6NM66 108 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 SHOXO15266 292 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 KCNAB3O43448 404 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 SLC25A17O43808 307 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 FCGR3BO75015 233 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 RAB3DO95716 219 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 IGHG2P01859 326 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 CSF1P09603 554 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 TBPP20226 339 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 PSG5Q15238 335 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 MSMO1Q15800 293 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 ZNF66Q6ZN08 573 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 ZNF818PQ6ZRF7 136 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 CCDC190Q86UF4 302 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 FOXRED2Q8IWF2 684 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 MFSD4AQ8N468 514 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 TMEM229BQ8NBD8 167 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 ZBTB34Q8NCN2 500 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 OR4D10Q8NGI6 311 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 OR6Q1Q8NGQ2 317 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 NOL4LQ96MY1 436 aaPredicted RBP9.37□□□□□ -0.91
HPS4-218ENST00000519774 CLCC1Q96S66 551 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 RNF5Q99942 180 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 CITED1Q99966 193 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 SOSTQ9BQB4 213 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 WNT10AQ9GZT5 417 aa9.37□□□□□ -0.91
HPS4-218ENST00000519774 METTL1Q9UBP6 276 aaKnown RBP9.37□□□□□ -0.91
HPS4-218ENST00000519774 AP4M1O00189 453 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 GSTZ1O43708 216 aaPredicted RBP9.36□□□□□ -0.91
HPS4-218ENST00000519774 FBXO24O75426 580 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 SPDEFO95238 335 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 HLA-DRB1P01911 266 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 RLN1P04808 185 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 GNRHRP30968 328 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 PPP5CP53041 499 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 CATR1Q13166 79 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 EIF4EBP1Q13541 118 aaPredicted RBP9.36□□□□□ -0.91
HPS4-218ENST00000519774 SCGB2B2Q4G0G5 96 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 TMEM177Q53S58 311 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 SPANXN2Q5MJ10 180 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 AADACL3Q5VUY0 350 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 LIN54Q6MZP7 749 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 FAAP20Q6NZ36 180 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 STEAP1BQ6NZ63 245 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 CENPVQ7Z7K6 275 aaPredicted RBP9.36□□□□□ -0.91
HPS4-218ENST00000519774 OR51H1Q8NH63 302 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 OR4S2Q8NH73 311 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 ABHD5Q8WTS1 349 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 BORCS5Q969J3 196 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 PARP11Q9NR21 331 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 TPSG1Q9NRR2 321 aa9.36□□□□□ -0.91
HPS4-218ENST00000519774 IGHV7-81A0A0B4J1V7 117 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 PSMB11A5LHX3 300 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 GPR31O00270 319 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 ATP6V0E1O15342 81 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 IGLV2-23P01705 113 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 CD74P04233 296 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 CD28P10747 220 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 PGAM2P15259 253 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 KIR2DS2P43631 304 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 LGALS7P47929 136 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 ZNF79Q15937 498 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 VMA21Q3ZAQ7 101 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 PHLDA2Q53GA4 152 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 TET2Q6N021 2002 aaPredicted RBP9.35□□□□□ -0.91
HPS4-218ENST00000519774 C10orf99Q6UWK7 81 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 STPG2Q8N412 459 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 ARRDC1Q8N5I2 433 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 OR5AU1Q8NGC0 362 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 OR4C16Q8NGL9 310 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 CHPT1Q8WUD6 406 aa9.35□□□□□ -0.91
HPS4-218ENST00000519774 THAP7Q9BT49 309 aaPredicted RBP9.35□□□□□ -0.91
HPS4-218ENST00000519774 A6NHS1 94 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 SRRM4A7MD48 611 aaKnown RBP9.34□□□□□ -0.91
HPS4-218ENST00000519774 DISC1C4P0D8 188 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 FCN1O00602 326 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 CA2P00918 260 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 AKAIN1P0CW23 69 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 GNB1P62873 340 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 SLC35B1P78383 322 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 NDPQ00604 133 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 MEF2DQ14814 521 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 KHDC1LQ5JSQ8 128 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 LPCAT3Q6P1A2 487 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 ZNF329Q86UD4 541 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 CMTM1Q8IZ96 169 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 SPAG16Q8N0X2 631 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 Q8N402 240 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 OSR1Q8TAX0 266 aaPredicted RBP9.34□□□□□ -0.91
HPS4-218ENST00000519774 WIPF2Q8TF74 440 aaPredicted RBP9.34□□□□□ -0.91
HPS4-218ENST00000519774 OR51J1Q9H342 316 aa9.34□□□□□ -0.91
HPS4-218ENST00000519774 ANKRD20A5PA0PJZ0 165 aa9.33□□□□□ -0.92
HPS4-218ENST00000519774 PLXNB1O43157 2135 aa9.33□□□□□ -0.92
HPS4-218ENST00000519774 RAMP3O60896 148 aa9.33□□□□□ -0.92
HPS4-218ENST00000519774 PGLYRP1O75594 196 aaPredicted RBP9.33□□□□□ -0.92
HPS4-218ENST00000519774 SAA1P0DJI8 122 aaPredicted RBP9.33□□□□□ -0.92
HPS4-218ENST00000519774 VDAC1P21796 283 aa9.33□□□□□ -0.92
HPS4-218ENST00000519774 PTBP1P26599 531 aaKnown RBP eCLIP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms