RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 AASSQ9UDR5 926 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 SMPXQ9UHP9 88 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 MAGEL2Q9UJ55 1249 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 LAMP5Q9UJQ1 280 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 MRPS16Q9Y3D3 137 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 R4GMQ9 66 aa4.49□□□□□ -1.69
CTNNA1-216ENST00000519489 IGHV3OR16-13A0A075B7E8 117 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 IGHV3-74A0A0B4J1X5 117 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 TEX22C9J3V5 150 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 SPINT2O43291 252 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 E2F6O75461 281 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 CPEP16870 476 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 MC5RP33032 325 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 NUDT2P50583 147 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 CMC4P56277 68 aaPredicted RBP4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 PRSS8Q16651 343 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 KLK9Q2XQG4 91 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 ZNF829Q3KNS6 432 aaPredicted RBP4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 TEX45Q8NA69 505 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 RHPN1-AS1Q9BWJ2 59 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 MAGT1Q9H0U3 335 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 TAF9BQ9HBM6 251 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 CMC2Q9NRP2 79 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 SLC35D1Q9NTN3 355 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 KLK9Q9UKQ9 250 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 HSF4Q9ULV5 492 aa4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 YTHDF2Q9Y5A9 579 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 SYNE2Q8WXH0 6885 aaKnown RBP4.48□□□□□ -1.69
CTNNA1-216ENST00000519489 F5H768 121 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 M0QYG6 137 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 AIPO00170 330 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 ZSCAN12O43309 604 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 SYT7O43581 403 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 YPEL1O60688 119 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 PRM2P04554 102 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 MRPL3P09001 348 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 RIDAP52758 137 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 STX1BP61266 288 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 RPL37AP61513 92 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 DAD1P61803 113 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 SF3A3Q12874 501 aaKnown RBP eCLIP4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 IL13RA2Q14627 380 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 CLINT1Q14677 625 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 TNXAQ16473 311 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 C6orf141Q5SZD1 244 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 FAM71F2Q6NXP2 309 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 HACD2Q6Y1H2 254 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 IDO2Q6ZQW0 420 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 Q6ZRU5 148 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 GAPTQ8N292 157 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 OR9Q2Q8NGE9 314 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 ZNF502Q8TBZ5 544 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 GNPDA2Q8TDQ7 276 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 NTN5Q8WTR8 489 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 OTULINQ96BN8 352 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 OPALINQ96PE5 141 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 YPEL2Q96QA6 119 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 GPHA2Q96T91 129 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 AGMATQ9BSE5 352 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 MROQ9BYG7 248 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 MS4A6AQ9H2W1 248 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 RHOFQ9HBH0 211 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 NEK6Q9HC98 313 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 LGALS13Q9UHV8 139 aa4.47□□□□□ -1.69
CTNNA1-216ENST00000519489 IGHV7-4-1A0A0J9YVY3 117 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 TMEM189A5PLL7 270 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 PANO1I0J062 215 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 GEMIN2O14893 280 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 MPPED1O15442 326 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 ZNF254O75437 659 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 TMEM225BP0DP42 221 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 AREGP15514 252 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 SLC2A5P22732 501 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 KRTAP10-8P60410 259 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 MICAQ29983 383 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 ACTL10Q5JWF8 245 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 UBE2UQ5VVX9 321 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 ERICH5Q6P6B1 374 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 FKBP9P1Q75LS8 142 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 UTS2BQ765I0 119 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 EEF1AKMT3Q96AZ1 226 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 FGGYQ96C11 551 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 NEDD4LQ96PU5 975 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 KCTD14Q9BQ13 255 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 C20orf24Q9BUV8 137 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 CHAC1Q9BUX1 264 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 IFT22Q9H7X7 185 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 IKZF2Q9UKS7 526 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 PUS1Q9Y606 427 aaKnown RBP eCLIP4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 RFNGQ9Y644 331 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 USH2AO75445 5202 aa4.46□□□□□ -1.7
CTNNA1-216ENST00000519489 IGHV3OR16-12A0A075B7B8 117 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 LOC107986453A0A1B0GWG9 222 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 CCDC182A6NF36 153 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 MARCH11A6NNE9 402 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 K7EMT4 169 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 DFFBO76075 338 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 GASTP01350 101 aa4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 APOHP02749 345 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-216ENST00000519489 CRYGCP07315 174 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms