RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 GABARAPH6UMI1 98 aa17.31■□□□□ 0.36
VEGFA-217ENST00000518538 SHOXO15266 292 aa17.31■□□□□ 0.36
VEGFA-217ENST00000518538 CRYZL1O95825 349 aa17.31■□□□□ 0.36
VEGFA-217ENST00000518538 IGLV2-23P01705 113 aa17.31■□□□□ 0.36
VEGFA-217ENST00000518538 VAX1Q5SQQ9 334 aa17.31■□□□□ 0.36
VEGFA-217ENST00000518538 COMMD1Q8N668 190 aa17.31■□□□□ 0.36
VEGFA-217ENST00000518538 BORCS5Q969J3 196 aa17.31■□□□□ 0.36
VEGFA-217ENST00000518538 TAS2R8Q9NYW2 309 aa17.31■□□□□ 0.36
VEGFA-217ENST00000518538 CTDSPLO15194 276 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 ATP6V0E1O15342 81 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 SLC25A17O43808 307 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 FCGR3BO75015 233 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 OPN1MWP04001 364 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 CSF1P09603 554 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 OPN1MW2P0DN77 364 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 OPN1MW3P0DN78 364 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 DGCR2P98153 550 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 IL18Q14116 193 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 MFSD4AQ8N468 514 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 OSR1Q8TAX0 266 aaPredicted RBP17.3■□□□□ 0.36
VEGFA-217ENST00000518538 TCTEX1D2Q8WW35 142 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 MMP27Q9H306 513 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 A3GALT2U3KPV4 340 aa17.3■□□□□ 0.36
VEGFA-217ENST00000518538 TCRBV4S1A1TA0A5B7 111 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 SRRM4A7MD48 611 aaKnown RBP17.29■□□□□ 0.36
VEGFA-217ENST00000518538 ADARB2-AS1A8MUL3 147 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 FCN1O00602 326 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 TSPAN15O95858 294 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 TBPP20226 339 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 VDAC1P21796 283 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 TNFSF8P32971 234 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 TSPAN5P62079 268 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 CX3CL1P78423 397 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 SSBP1Q04837 148 aaKnown RBP17.29■□□□□ 0.36
VEGFA-217ENST00000518538 NSUN5P1Q3KNT7 163 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 ZNF818PQ6ZRF7 136 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 SMIM4Q8WVI0 70 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 FXYD6Q9H0Q3 95 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 PARP11Q9NR21 331 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 TPSG1Q9NRR2 321 aa17.29■□□□□ 0.36
VEGFA-217ENST00000518538 M0QYG6 137 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 TNFSF12O43508 249 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 CRYGBP07316 175 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 GNRHRP30968 328 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 KIR2DS2P43631 304 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 NDPQ00604 133 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 CFHR3Q02985 330 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 OR2B11Q5JQS5 317 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 TREML4Q6UXN2 200 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 PPP1R27Q86WC6 154 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 OR4S2Q8NH73 311 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 CLCC1Q96S66 551 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 GPHA2Q96T91 129 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 SOSTQ9BQB4 213 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 NDUFA13Q9P0J0 144 aa17.28■□□□□ 0.36
VEGFA-217ENST00000518538 TSSC4Q9Y5U2 329 aaPredicted RBP17.28■□□□□ 0.36
VEGFA-217ENST00000518538 CA2P00918 260 aa17.27■□□□□ 0.36
VEGFA-217ENST00000518538 CD3DP04234 171 aa17.27■□□□□ 0.36
VEGFA-217ENST00000518538 UBE2KP61086 200 aa17.27■□□□□ 0.36
VEGFA-217ENST00000518538 CATR1Q13166 79 aa17.27■□□□□ 0.36
VEGFA-217ENST00000518538 VMA21Q3ZAQ7 101 aa17.27■□□□□ 0.36
VEGFA-217ENST00000518538 RNASE10Q5GAN6 216 aaKnown RBP17.27■□□□□ 0.36
VEGFA-217ENST00000518538 TEX38Q6PEX7 206 aa17.27■□□□□ 0.36
VEGFA-217ENST00000518538 ZNF562Q6V9R5 426 aa17.27■□□□□ 0.36
VEGFA-217ENST00000518538 TMEM229BQ8NBD8 167 aa17.27■□□□□ 0.36
VEGFA-217ENST00000518538 DGCR14Q96DF8 476 aaKnown RBP17.27■□□□□ 0.36
VEGFA-217ENST00000518538 FABP12A6NFH5 140 aa17.26■□□□□ 0.35
VEGFA-217ENST00000518538 CRIP2P52943 208 aaPredicted RBP17.26■□□□□ 0.35
VEGFA-217ENST00000518538 BRWD1-AS2P59051 145 aa17.26■□□□□ 0.35
VEGFA-217ENST00000518538 TAS2R19P59542 299 aa17.26■□□□□ 0.35
VEGFA-217ENST00000518538 TEX45Q8NA69 505 aa17.26■□□□□ 0.35
VEGFA-217ENST00000518538 TINAGL1Q9GZM7 467 aaPredicted RBP17.26■□□□□ 0.35
VEGFA-217ENST00000518538 FBXO7Q9Y3I1 522 aa17.26■□□□□ 0.35
VEGFA-217ENST00000518538 TRAV41A0A0B4J266 112 aa17.25■□□□□ 0.35
VEGFA-217ENST00000518538 A0A1W2PRX2 142 aa17.25■□□□□ 0.35
VEGFA-217ENST00000518538 IGHG4P01861 327 aa17.25■□□□□ 0.35
VEGFA-217ENST00000518538 CD74P04233 296 aa17.25■□□□□ 0.35
VEGFA-217ENST00000518538 IFNA6P05013 189 aa17.25■□□□□ 0.35
VEGFA-217ENST00000518538 S100A5P33763 92 aa17.25■□□□□ 0.35
VEGFA-217ENST00000518538 FOXE3Q13461 319 aa17.25■□□□□ 0.35
VEGFA-217ENST00000518538 KHDC1LQ5JSQ8 128 aa17.25■□□□□ 0.35
VEGFA-217ENST00000518538 LPCAT3Q6P1A2 487 aa17.25■□□□□ 0.35
VEGFA-217ENST00000518538 ARRDC1Q8N5I2 433 aa17.25■□□□□ 0.35
VEGFA-217ENST00000518538 WSB1Q9Y6I7 421 aa17.25■□□□□ 0.35
VEGFA-217ENST00000518538 DPPA5A6NC42 116 aa17.24■□□□□ 0.35
VEGFA-217ENST00000518538 G3V318 75 aa17.24■□□□□ 0.35
VEGFA-217ENST00000518538 GPR31O00270 319 aa17.24■□□□□ 0.35
VEGFA-217ENST00000518538 RBFOX2O43251 390 aaKnown RBP eCLIP17.24■□□□□ 0.351e-7■□□□□ 8.1
VEGFA-217ENST00000518538 GSTZ1O43708 216 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-217ENST00000518538 ELANEP08246 267 aa17.24■□□□□ 0.35
VEGFA-217ENST00000518538 SAA1P0DJI8 122 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-217ENST00000518538 EGR2P11161 476 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-217ENST00000518538 PPIFP30405 207 aaKnown RBP17.24■□□□□ 0.35
VEGFA-217ENST00000518538 UCP3P55916 312 aa17.24■□□□□ 0.35
VEGFA-217ENST00000518538 AADACL3Q5VUY0 350 aa17.24■□□□□ 0.35
VEGFA-217ENST00000518538 CMTM1Q8IZ96 169 aa17.24■□□□□ 0.35
VEGFA-217ENST00000518538 RNF152Q8N8N0 203 aa17.24■□□□□ 0.35
VEGFA-217ENST00000518538 OR4F17Q8NGA8 305 aa17.24■□□□□ 0.35
VEGFA-217ENST00000518538 ABHD5Q8WTS1 349 aa17.24■□□□□ 0.35
VEGFA-217ENST00000518538 OR4F4Q96R69 305 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms