RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 SAMD12Q8N8I0 201 aa10.97□□□□□ -0.65
PDGFRB-202ENST00000517488 ZNF491Q8N8L2 437 aa10.97□□□□□ -0.65
PDGFRB-202ENST00000517488 BEST4Q8NFU0 473 aa10.97□□□□□ -0.65
PDGFRB-202ENST00000517488 C4orf3Q8WVX3 66 aa10.97□□□□□ -0.65
PDGFRB-202ENST00000517488 ADTRPQ96IZ2 230 aa10.97□□□□□ -0.65
PDGFRB-202ENST00000517488 NAA50Q9GZZ1 169 aaKnown RBP10.97□□□□□ -0.65
PDGFRB-202ENST00000517488 AURKAIP1Q9NWT8 199 aaPredicted RBP10.97□□□□□ -0.65
PDGFRB-202ENST00000517488 FOXA2Q9Y261 457 aaPredicted RBP10.97□□□□□ -0.65
PDGFRB-202ENST00000517488 DUS4LO95620 317 aaKnown RBP10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 CRYZL1O95825 349 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 RRASP10301 218 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 HOXD3P31249 432 aaPredicted RBP10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 ARPC4P59998 168 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 KRTAP10-11P60412 298 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 RPL30P62888 115 aaKnown RBP10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 FXYD3Q14802 87 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 UNQ5815/PRO19632Q6UWF5 114 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 LFNGQ8NES3 379 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 GRPEL2Q8TAA5 225 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 ARPC1AQ92747 370 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 SNAPC3Q92966 411 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 S100A16Q96FQ6 103 aaKnown RBP10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 UBE2E2Q96LR5 201 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 OR5B12Q96R08 314 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 VSIG4Q9Y279 399 aa10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 RBMX2Q9Y388 322 aaKnown RBP10.96□□□□□ -0.65
PDGFRB-202ENST00000517488 DNAH9Q9NYC9 4486 aa10.96□□□□□ -0.66
PDGFRB-202ENST00000517488 I3L521 148 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 AADACP22760 399 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 FCGR2CP31995 323 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 TAS2R20P59543 309 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 GNB1P62873 340 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 TMEM267Q0VDI3 215 aaPredicted RBP10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 CBX3Q13185 183 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 EIF4EBP1Q13541 118 aaPredicted RBP10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 MRGPRG-AS1Q2M3A8 158 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 AKIRIN2Q53H80 203 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 ACTBL2Q562R1 376 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 TMEM69Q5SWH9 247 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 REC114Q7Z4M0 266 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 TCTEX1D1Q8N7M0 179 aa10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 KCTD12Q96CX2 325 aaKnown RBP10.95□□□□□ -0.66
PDGFRB-202ENST00000517488 FCGR3BO75015 233 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 SLC22A5O76082 557 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 CNIH1O95406 144 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 EIF4EP06730 217 aaKnown RBP10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 CBX5P45973 191 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 FHL3Q13643 280 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 OR2B11Q5JQS5 317 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 ASPHD1Q5U4P2 390 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 ANKRD13BQ86YJ7 626 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 OR11H1Q8NG94 326 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 OR1N2Q8NGR9 330 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 MS4A10Q96PG2 267 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 GPHA2Q96T91 129 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 ALX4Q9H161 411 aaPredicted RBP10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 COMMD3Q9UBI1 195 aa10.94□□□□□ -0.66
PDGFRB-202ENST00000517488 BRWD1-AS2P59051 145 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 UBE2KP61086 200 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 RUNX1Q01196 453 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 EGFEM1PQ0D2K5 195 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 CTF1Q16619 201 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 IDO2Q6ZQW0 420 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 KCTD9Q7L273 389 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 OVCH2Q7RTZ1 564 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 TEX45Q8NA69 505 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 OR5T1Q8NG75 326 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 OR5M8Q8NGP6 311 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 OSR1Q8TAX0 266 aaPredicted RBP10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 MRAPQ8TCY5 172 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 SECTM1Q8WVN6 248 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 MCRIP2Q9BUT9 160 aaKnown RBP10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 CCL28Q9NRJ3 127 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 TAS2R8Q9NYW2 309 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 ANAPC10Q9UM13 185 aa10.93□□□□□ -0.66
PDGFRB-202ENST00000517488 GABARAPO95166 117 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 PPYP01298 95 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 CDK10Q15131 360 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 PRSS8Q16651 343 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 VMA21Q3ZAQ7 101 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 GPR107Q5VW38 600 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 MFSD4AQ8N468 514 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 OR5AP2Q8NGF4 316 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 TCTEX1D2Q8WW35 142 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 HSD17B10Q99714 261 aaKnown RBP10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 DCUN1D5Q9BTE7 237 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 MRPS26Q9BYN8 205 aaKnown RBP10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 GPR61Q9BZJ8 451 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 IFT46Q9NQC8 304 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 PRELID3BQ9Y3B1 194 aa10.92□□□□□ -0.66
PDGFRB-202ENST00000517488 WI2-2373I1.2A0A1W2PRP0 233 aa10.91□□□□□ -0.66
PDGFRB-202ENST00000517488 K7EIL1 84 aa10.91□□□□□ -0.66
PDGFRB-202ENST00000517488 TNFSF12O43508 249 aa10.91□□□□□ -0.66
PDGFRB-202ENST00000517488 IGHV3-11P01762 117 aa10.91□□□□□ -0.66
PDGFRB-202ENST00000517488 APOA1P02647 267 aa10.91□□□□□ -0.66
PDGFRB-202ENST00000517488 SAA1P0DJI8 122 aaPredicted RBP10.91□□□□□ -0.66
PDGFRB-202ENST00000517488 APELAP0DMC3 54 aa10.91□□□□□ -0.66
PDGFRB-202ENST00000517488 ALDH3B2P48448 385 aa10.91□□□□□ -0.66
PDGFRB-202ENST00000517488 RORCP51449 518 aa10.91□□□□□ -0.66
PDGFRB-202ENST00000517488 TPPP2P59282 170 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms