RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 NECAP2Q9NVZ3 263 aa8.94□□□□□ -0.98
VCAN-212ENST00000515397 COMMD3Q9UBI1 195 aa8.94□□□□□ -0.98
VCAN-212ENST00000515397 ANXA10Q9UJ72 324 aa8.94□□□□□ -0.98
VCAN-212ENST00000515397 TNCP24821 2201 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 TRIM64CA6NLI5 447 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 TNFSF12O43508 249 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 FCGR3BO75015 233 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 SCGNO76038 276 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 HLA-DQB1P01920 261 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 CRYGBP07316 175 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 SMIM18P0DKX4 95 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 AADACP22760 399 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 FCGR2CP31995 323 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 ARPC4P59998 168 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 RTL8BQ17RB0 113 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 MRGPRG-AS1Q2M3A8 158 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 ACTBL2Q562R1 376 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 HOGA1Q86XE5 327 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 VKORC1L1Q8N0U8 176 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 C4orf3Q8WVX3 66 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 DDB2Q92466 427 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 CCL28Q9NRJ3 127 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 ZNF355PQ9NSJ1 428 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 FOXA2Q9Y261 457 aaPredicted RBP8.93□□□□□ -0.98
VCAN-212ENST00000515397 VSIG4Q9Y279 399 aa8.93□□□□□ -0.98
VCAN-212ENST00000515397 MRPS7Q9Y2R9 242 aaKnown RBP8.93□□□□□ -0.98
VCAN-212ENST00000515397 I3L521 148 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 K7EIL1 84 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 XRCC3O43542 346 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 DIRAS3O95661 229 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 EIF4EP06730 217 aaKnown RBP8.92□□□□□ -0.98
VCAN-212ENST00000515397 CTXN2P0C2S0 81 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 LGALS7P47929 136 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 FXYD4P59646 89 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 TMEM177Q53S58 311 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 DEFB121Q5J5C9 76 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 ASPHD1Q5U4P2 390 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 ZNF645Q8N7E2 425 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 OR1N2Q8NGR9 330 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 OR13F1Q8NGS4 319 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 MYOZ3Q8TDC0 251 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 SECTM1Q8WVN6 248 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 ARPC1AQ92747 370 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 SNAPC3Q92966 411 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 S100A16Q96FQ6 103 aaKnown RBP8.92□□□□□ -0.98
VCAN-212ENST00000515397 TAS2R8Q9NYW2 309 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 ZNF580Q9UK33 172 aa8.92□□□□□ -0.98
VCAN-212ENST00000515397 RBMX2Q9Y388 322 aaKnown RBP8.92□□□□□ -0.98
VCAN-212ENST00000515397 MSGN1A6NI15 193 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 RFX2P48378 723 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 SCAND1P57086 179 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 BRWD1-AS2P59051 145 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 TPPP2P59282 170 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 TAS2R20P59543 309 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 TMEM267Q0VDI3 215 aaPredicted RBP8.91□□□□□ -0.98
VCAN-212ENST00000515397 CBX3Q13185 183 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 UBE2NLQ5JXB2 153 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 GPR107Q5VW38 600 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 TCTEX1D2Q8WW35 142 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 SLC25A46Q96AG3 418 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 UBE2E2Q96LR5 201 aa8.91□□□□□ -0.98
VCAN-212ENST00000515397 HPGDSO60760 199 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 SPDEFO95238 335 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 PMP2P02689 132 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 TRGV3P03979 118 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 SLC6A1P30531 599 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 CRIP2P52943 208 aaPredicted RBP8.9□□□□□ -0.98
VCAN-212ENST00000515397 SLURP1P55000 103 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 TNXAQ16473 311 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 AKIRIN2Q53H80 203 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 TMEM69Q5SWH9 247 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 C10orf55Q5SWW7 151 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 KCTD9Q7L273 389 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 SSX9Q7RTT3 188 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 SNX29P2Q8IUI4 249 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 MFSD4AQ8N468 514 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 ACOT12Q8WYK0 555 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 DCUN1D4Q92564 292 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 DPF1Q92782 380 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 ADTRPQ96IZ2 230 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 IFT46Q9NQC8 304 aa8.9□□□□□ -0.98
VCAN-212ENST00000515397 IGHV4OR15-8A0A075B7B6 117 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 A0A087WW49 117 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 A0A0A6YYH2 397 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 ANKRD34BA5PLL1 514 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 A6NJ64 397 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 SEC14L6B5MCN3 397 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 RAMP3O60896 148 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 RBMXL2O75526 392 aaKnown RBP8.89□□□□□ -0.99
VCAN-212ENST00000515397 PRH1P02810 166 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 SAA1P0DJI8 122 aaPredicted RBP8.89□□□□□ -0.99
VCAN-212ENST00000515397 RRASP10301 218 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 MYOD1P15172 320 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 HLA-DMAP28067 261 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 UBE2KP61086 200 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 ZNF616Q08AN1 781 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 EIF4EBP1Q13541 118 aaPredicted RBP8.89□□□□□ -0.99
VCAN-212ENST00000515397 PRSS8Q16651 343 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 VMA21Q3ZAQ7 101 aa8.89□□□□□ -0.99
VCAN-212ENST00000515397 RNASE12Q5GAN4 147 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms