RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 IFITM3Q01628 133 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 NAB1Q13506 487 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 TOMM34Q15785 309 aaPredicted RBP3.82□□□□□ -1.8
CAST-243ENST00000515160 CDNFQ49AH0 187 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 TRMT12Q53H54 448 aaKnown RBP3.82□□□□□ -1.8
CAST-243ENST00000515160 HBMQ6B0K9 141 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 MRPL52Q86TS9 123 aaKnown RBP3.82□□□□□ -1.8
CAST-243ENST00000515160 BOD1L2Q8IYS8 172 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 LGI3Q8N145 548 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 LYG1Q8N1E2 194 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 NECAP1Q8NC96 275 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 OR5P2Q8WZ92 322 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 PHYHIPLQ96FC7 376 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 C7orf50Q9BRJ6 194 aaKnown RBP3.82□□□□□ -1.8
CAST-243ENST00000515160 TMEM243Q9BU79 118 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 EFCAB11Q9BUY7 163 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 C1QTNF6Q9BXI9 259 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 SLC25A39Q9BZJ4 359 aaPredicted RBP3.82□□□□□ -1.8
CAST-243ENST00000515160 NOX3Q9HBY0 568 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 NKIRAS1Q9NYS0 192 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 SIGLEC7Q9Y286 467 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 SOX21Q9Y651 276 aaPredicted RBP3.82□□□□□ -1.8
CAST-243ENST00000515160 STAB2Q8WWQ8 2551 aa3.82□□□□□ -1.8
CAST-243ENST00000515160 IGLV1-50A0A075B6I6 118 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 IGHV3-64DA0A0J9YX35 117 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 ISPDA4D126 451 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 TAAR5O14804 337 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 SRSF10O75494 262 aaKnown RBP3.81□□□□□ -1.8
CAST-243ENST00000515160 REM1O75628 298 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 SLC22A5O76082 557 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 CPMP14384 443 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 HLA-GP17693 338 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 PAX6P26367 422 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 SERPINB1P30740 379 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 APLNRP35414 380 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 SSR2P43308 183 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 IDH3GP51553 393 aaPredicted RBP3.81□□□□□ -1.8
CAST-243ENST00000515160 PLTPP55058 493 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 DR1Q01658 176 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 PRKCDQ05655 676 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 SLC9A3R2Q15599 337 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 TRAM1Q15629 374 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 TTC32Q5I0X7 151 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 RBM48Q5RL73 367 aaKnown RBP3.81□□□□□ -1.8
CAST-243ENST00000515160 HHATQ5VTY9 493 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 KHDRBS2Q5VWX1 349 aaKnown RBP3.81□□□□□ -1.8
CAST-243ENST00000515160 TMEM236Q5W0B7 351 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 PLEKHG7Q6ZR37 379 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 PCP2Q8IVA1 136 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 SLC35F6Q8N357 371 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 OR4K17Q8NGC6 315 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 OR52R1Q8NGF1 315 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 OR2V1Q8NHB1 315 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 STAG3L4Q8TBR4 150 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 SFXN5Q8TD22 340 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 FAM104AQ969W3 186 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 PTX4Q96A99 478 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 DOK1Q99704 481 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 IFI27L2Q9H2X8 130 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 METTL8Q9H825 291 aaKnown RBP3.81□□□□□ -1.8
CAST-243ENST00000515160 RBFOX1Q9NWB1 397 aaKnown RBP3.81□□□□□ -1.8
CAST-243ENST00000515160 ANXA10Q9UJ72 324 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 MCTS1Q9ULC4 181 aaKnown RBP3.81□□□□□ -1.8
CAST-243ENST00000515160 SNX12Q9UMY4 172 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 SNX24Q9Y343 169 aa3.81□□□□□ -1.8
CAST-243ENST00000515160 TET2Q6N021 2002 aaPredicted RBP3.8□□□□□ -1.8
CAST-243ENST00000515160 IGKV3D-20A0A0C4DH25 116 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 PSPHP1O15172 72 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 TCAPO15273 167 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 WISP3O95389 354 aaPredicted RBP3.8□□□□□ -1.8
CAST-243ENST00000515160 SNAP29O95721 258 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 IGKV3-15P01624 115 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 COL8A2P25067 703 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 CRABP2P29373 138 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 EVI2BP34910 448 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 POLR2IP36954 125 aaKnown RBP3.8□□□□□ -1.8
CAST-243ENST00000515160 ERFP50548 548 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 WNT4P56705 351 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 RAP1AP62834 184 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 TSNQ15631 228 aaKnown RBP3.8□□□□□ -1.8
CAST-243ENST00000515160 ZNF79Q15937 498 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 PRSS8Q16651 343 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 IDNKQ5T6J7 187 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 MED27Q6P2C8 311 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 UGT2A3Q6UWM9 527 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 C3orf62Q6ZUJ4 267 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 MARCH3Q86UD3 253 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 CDS1Q92903 461 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 YIPF5Q969M3 257 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 MUCL1Q96DR8 90 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 ZNF488Q96MN9 340 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 CAMK2N2Q96S95 79 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 TMED9Q9BVK6 235 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 SAMD10Q9BYL1 202 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 DERL2Q9GZP9 239 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 C1orf109Q9NX04 203 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 ORC6Q9Y5N6 252 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 USH1CQ9Y6N9 552 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 KIF25-AS1Q9Y6Z4 181 aa3.8□□□□□ -1.8
CAST-243ENST00000515160 HECTD4Q9Y4D8 3996 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms