RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, human

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIL1-215	ENST00000515008	ALX4	Q9H161	411 aa	Predicted RBP	13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	OR51E2	Q9H255	320 aa		13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	ELF5	Q9UKW6	265 aa	Predicted RBP	13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	LSM4	Q9Y4Z0	139 aa	Known RBP	13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	ETV7	Q9Y603	341 aa		13.66	□□□□□ -0.22
SIL1-215	ENST00000515008	IGHV4OR15-8	A0A075B7B6	117 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008		A0A087WW49	117 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	TMEM235	A6NFC5	223 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	SLC22A5	O76082	557 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	BRI3	O95415	125 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	TRGV3	P03979	118 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	HSPB1	P04792	205 aa	Known RBP	13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	SNRPB	P14678	240 aa	Known RBP	13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	SDC2	P34741	201 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	GNG2	P59768	71 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	SSBP2	P81877	361 aa	Predicted RBP	13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	VMA21	Q3ZAQ7	101 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	KCTD21	Q4G0X4	260 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	CNIH2	Q6PI25	160 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	ZNF645	Q8N7E2	425 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	TEX45	Q8NA69	505 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	NUDCD2	Q8WVJ2	157 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	DLX4	Q92988	240 aa	Predicted RBP	13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	PRR25	Q96S07	402 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	RHBDL2	Q9NX52	303 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	TNC	P24821	2201 aa		13.65	□□□□□ -0.22
SIL1-215	ENST00000515008	TMEM127	O75204	238 aa		13.64	□□□□□ -0.23
SIL1-215	ENST00000515008	SLURP1	P55000	103 aa		13.64	□□□□□ -0.23
SIL1-215	ENST00000515008	UBE2K	P61086	200 aa		13.64	□□□□□ -0.23
SIL1-215	ENST00000515008	C11orf87	Q6NUJ2	197 aa		13.64	□□□□□ -0.23
SIL1-215	ENST00000515008	OSR1	Q8TAX0	266 aa	Predicted RBP	13.64	□□□□□ -0.23
SIL1-215	ENST00000515008	MS4A10	Q96PG2	267 aa		13.64	□□□□□ -0.23
SIL1-215	ENST00000515008	ST6GALNAC5	Q9BVH7	336 aa		13.64	□□□□□ -0.23
SIL1-215	ENST00000515008	OR2W1	Q9Y3N9	320 aa		13.64	□□□□□ -0.23
SIL1-215	ENST00000515008	DNAH9	Q9NYC9	4486 aa		13.64	□□□□□ -0.23
SIL1-215	ENST00000515008		A0A0A6YYH2	397 aa		13.63	□□□□□ -0.23
SIL1-215	ENST00000515008		A0A0G2JLM5	398 aa		13.63	□□□□□ -0.23
SIL1-215	ENST00000515008		A6NJ64	397 aa		13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	SRRM4	A7MD48	611 aa	Known RBP	13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	CREBL2	O60519	120 aa	Predicted RBP	13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	SAP30	O75446	220 aa		13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	CRYZL1	O95825	349 aa		13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	IGHV3-11	P01762	117 aa		13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	HLA-DQB1	P01920	261 aa		13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	NHLRC4	P0CG21	123 aa	Predicted RBP	13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	CD36	P16671	472 aa		13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	PJVK	Q0ZLH3	352 aa		13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	ZNF355P	Q9NSJ1	428 aa		13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	COL7A1	Q02388	2944 aa		13.63	□□□□□ -0.23
SIL1-215	ENST00000515008	LOC100506127	A0A0U1RQW1	187 aa		13.62	□□□□□ -0.23
SIL1-215	ENST00000515008	C13orf42	A0A1B0GVH6	325 aa		13.62	□□□□□ -0.23
SIL1-215	ENST00000515008	LINC00473	A8K010	186 aa		13.62	□□□□□ -0.23
SIL1-215	ENST00000515008	MXD1	Q05195	221 aa		13.62	□□□□□ -0.23
SIL1-215	ENST00000515008	NEDD8	Q15843	81 aa		13.62	□□□□□ -0.23
SIL1-215	ENST00000515008	ACSM6	Q6P461	480 aa		13.62	□□□□□ -0.23
SIL1-215	ENST00000515008	OR6Q1	Q8NGQ2	317 aa		13.62	□□□□□ -0.23
SIL1-215	ENST00000515008	ANXA10	Q9UJ72	324 aa		13.62	□□□□□ -0.23
SIL1-215	ENST00000515008	MRPS7	Q9Y2R9	242 aa	Known RBP	13.62	□□□□□ -0.23
SIL1-215	ENST00000515008	RBMX2	Q9Y388	322 aa	Known RBP	13.62	□□□□□ -0.23
SIL1-215	ENST00000515008	PRELID3B	Q9Y3B1	194 aa		13.62	□□□□□ -0.23
SIL1-215	ENST00000515008	SSX5	O60225	188 aa		13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	LY86	O95711	162 aa		13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	CLEC2L	P0C7M8	214 aa		13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	ZP3	P21754	424 aa		13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	AADAC	P22760	399 aa		13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	NFYA	P23511	347 aa	Predicted RBP	13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	PRSS8	Q16651	343 aa		13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	TIMM50	Q3ZCQ8	353 aa		13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	KCTD9	Q7L273	389 aa		13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	OVCH2	Q7RTZ1	564 aa		13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	OR5T1	Q8NG75	326 aa		13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	SLC25A38	Q96DW6	304 aa		13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	RANGRF	Q9HD47	186 aa	Predicted RBP	13.61	□□□□□ -0.23
SIL1-215	ENST00000515008	TUSC2	O75896	110 aa		13.6	□□□□□ -0.23
SIL1-215	ENST00000515008	MRGPRG-AS1	Q2M3A8	158 aa		13.6	□□□□□ -0.23
SIL1-215	ENST00000515008	IDNK	Q5T6J7	187 aa		13.6	□□□□□ -0.23
SIL1-215	ENST00000515008	PHB2	Q99623	299 aa		13.6	□□□□□ -0.23
SIL1-215	ENST00000515008	HSD17B10	Q99714	261 aa	Known RBP	13.6	□□□□□ -0.23
SIL1-215	ENST00000515008	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.6	□□□□□ -0.23
SIL1-215	ENST00000515008	RNF167	Q9H6Y7	350 aa		13.6	□□□□□ -0.23
SIL1-215	ENST00000515008	IGKV1D-13	A0A0B4J2D9	117 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	FCGR3B	O75015	233 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	SAA1	P0DJI8	122 aa	Predicted RBP	13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	IGKV1-13	P0DP09	117 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	CDK10	Q15131	360 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	MSMO1	Q15800	293 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	TNXA	Q16473	311 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	CROCCP3	Q8IVE0	287 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	OR5H6	Q8NGV6	325 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	OR4S2	Q8NH73	311 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	SRSF12	Q8WXF0	261 aa	Known RBP	13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	USMG5	Q96IX5	58 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	OR4C12	Q96R67	309 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	ELOVL1	Q9BW60	279 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	SMAD5-AS1	Q9Y6J3	95 aa		13.59	□□□□□ -0.23
SIL1-215	ENST00000515008	TRAV18	A0A075B6X5	111 aa		13.58	□□□□□ -0.24
SIL1-215	ENST00000515008		J3QRK9	145 aa		13.58	□□□□□ -0.24
SIL1-215	ENST00000515008	ACTL6B	O94805	426 aa		13.58	□□□□□ -0.24
SIL1-215	ENST00000515008	IGLV2-14	P01704	120 aa		13.58	□□□□□ -0.24

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