RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SSX5O60225 188 aa19.02■□□□□ 0.64
SNF8-213ENST00000514929 TNFAIP8O95379 198 aa19.02■□□□□ 0.64
SNF8-213ENST00000514929 IGLV2-23P01705 113 aa19.02■□□□□ 0.64
SNF8-213ENST00000514929 NFYAP23511 347 aaPredicted RBP19.02■□□□□ 0.64
SNF8-213ENST00000514929 DUTP33316 252 aaKnown RBP19.02■□□□□ 0.64
SNF8-213ENST00000514929 ANXA10Q9UJ72 324 aa19.02■□□□□ 0.64
SNF8-213ENST00000514929 OR2W1Q9Y3N9 320 aa19.02■□□□□ 0.64
SNF8-213ENST00000514929 ARPC1BO15143 372 aaKnown RBP19.01■□□□□ 0.63
SNF8-213ENST00000514929 AIREO43918 545 aa19.01■□□□□ 0.63
SNF8-213ENST00000514929 DGCR2P98153 550 aa19.01■□□□□ 0.63
SNF8-213ENST00000514929 ZNF645Q8N7E2 425 aa19.01■□□□□ 0.63
SNF8-213ENST00000514929 MS4A10Q96PG2 267 aa19.01■□□□□ 0.63
SNF8-213ENST00000514929 A0A0A6YYH2 397 aa19■□□□□ 0.63
SNF8-213ENST00000514929 A6NJ64 397 aa19■□□□□ 0.63
SNF8-213ENST00000514929 LINC00473A8K010 186 aa19■□□□□ 0.63
SNF8-213ENST00000514929 CRYZL1O95825 349 aa19■□□□□ 0.63
SNF8-213ENST00000514929 PJVKQ0ZLH3 352 aa19■□□□□ 0.63
SNF8-213ENST00000514929 DDB2Q92466 427 aa19■□□□□ 0.63
SNF8-213ENST00000514929 ALX4Q9H161 411 aaPredicted RBP19■□□□□ 0.63
SNF8-213ENST00000514929 DIABLOQ9NR28 239 aa19■□□□□ 0.63
SNF8-213ENST00000514929 SPATA2Q9UM82 520 aa19■□□□□ 0.63
SNF8-213ENST00000514929 TMEM127O75204 238 aa18.99■□□□□ 0.63
SNF8-213ENST00000514929 SLC22A5O76082 557 aa18.99■□□□□ 0.63
SNF8-213ENST00000514929 HLA-DQB1P01920 261 aa18.99■□□□□ 0.63
SNF8-213ENST00000514929 CRYGBP07316 175 aa18.99■□□□□ 0.63
SNF8-213ENST00000514929 TPPP2P59282 170 aa18.99■□□□□ 0.63
SNF8-213ENST00000514929 ASPHD1Q5U4P2 390 aa18.99■□□□□ 0.63
SNF8-213ENST00000514929 CROCCP3Q8IVE0 287 aa18.99■□□□□ 0.63
SNF8-213ENST00000514929 SLA2Q9H6Q3 261 aa18.99■□□□□ 0.63
SNF8-213ENST00000514929 ZNF355PQ9NSJ1 428 aa18.99■□□□□ 0.63
SNF8-213ENST00000514929 SRRM4A7MD48 611 aaKnown RBP18.98■□□□□ 0.63
SNF8-213ENST00000514929 RAMP3O60896 148 aa18.98■□□□□ 0.63
SNF8-213ENST00000514929 TUSC2O75896 110 aa18.98■□□□□ 0.63
SNF8-213ENST00000514929 LGALS1P09382 135 aaKnown RBP18.98■□□□□ 0.63
SNF8-213ENST00000514929 TGFBR1P36897 503 aa18.98■□□□□ 0.63
SNF8-213ENST00000514929 ARPC4P59998 168 aa18.98■□□□□ 0.63
SNF8-213ENST00000514929 VMA21Q3ZAQ7 101 aa18.98■□□□□ 0.63
SNF8-213ENST00000514929 BEST4Q8NFU0 473 aa18.98■□□□□ 0.63
SNF8-213ENST00000514929 YIPF6Q96EC8 236 aa18.98■□□□□ 0.63
SNF8-213ENST00000514929 IGHV3-11P01762 117 aa18.97■□□□□ 0.63
SNF8-213ENST00000514929 TRGV3P03979 118 aa18.97■□□□□ 0.63
SNF8-213ENST00000514929 LSM3P62310 102 aaKnown RBP18.97■□□□□ 0.63
SNF8-213ENST00000514929 SSBP2P81877 361 aaPredicted RBP18.97■□□□□ 0.63
SNF8-213ENST00000514929 KCTD9Q7L273 389 aa18.97■□□□□ 0.63
SNF8-213ENST00000514929 OSR1Q8TAX0 266 aaPredicted RBP18.97■□□□□ 0.63
SNF8-213ENST00000514929 DCUN1D5Q9BTE7 237 aa18.97■□□□□ 0.63
SNF8-213ENST00000514929 AUNIPQ9H7T9 357 aa18.97■□□□□ 0.63
SNF8-213ENST00000514929 RBMX2Q9Y388 322 aaKnown RBP18.97■□□□□ 0.63
SNF8-213ENST00000514929 PRELID3BQ9Y3B1 194 aa18.97■□□□□ 0.63
SNF8-213ENST00000514929 IGKV1D-13A0A0B4J2D9 117 aa18.96■□□□□ 0.63
SNF8-213ENST00000514929 LINC01619G3V211 115 aa18.96■□□□□ 0.63
SNF8-213ENST00000514929 FCGR3BO75015 233 aa18.96■□□□□ 0.63
SNF8-213ENST00000514929 IGKV1-13P0DP09 117 aa18.96■□□□□ 0.63
SNF8-213ENST00000514929 UBE2KP61086 200 aa18.96■□□□□ 0.63
SNF8-213ENST00000514929 GVQW1Q8N7I0 195 aa18.96■□□□□ 0.63
SNF8-213ENST00000514929 TEX45Q8NA69 505 aa18.96■□□□□ 0.63
SNF8-213ENST00000514929 POC5Q8NA72 575 aa18.96■□□□□ 0.63
SNF8-213ENST00000514929 OR5T1Q8NG75 326 aa18.96■□□□□ 0.63
SNF8-213ENST00000514929 DCUN1D4Q92564 292 aa18.96■□□□□ 0.63
SNF8-213ENST00000514929 RPS19P39019 145 aaKnown RBP18.95■□□□□ 0.62
SNF8-213ENST00000514929 OR2B11Q5JQS5 317 aa18.95■□□□□ 0.62
SNF8-213ENST00000514929 HOGA1Q86XE5 327 aa18.95■□□□□ 0.62
SNF8-213ENST00000514929 TMEM68Q96MH6 324 aa18.95■□□□□ 0.62
SNF8-213ENST00000514929 SCOCQ9UIL1 159 aa18.95■□□□□ 0.62
SNF8-213ENST00000514929 MRPS7Q9Y2R9 242 aaKnown RBP18.95■□□□□ 0.62
SNF8-213ENST00000514929 IGHV4OR15-8A0A075B7B6 117 aa18.94■□□□□ 0.62
SNF8-213ENST00000514929 A0A087WW49 117 aa18.94■□□□□ 0.62
SNF8-213ENST00000514929 OVOL1O14753 267 aa18.94■□□□□ 0.62
SNF8-213ENST00000514929 ECI1P42126 302 aa18.94■□□□□ 0.62
SNF8-213ENST00000514929 SLURP1P55000 103 aa18.94■□□□□ 0.62
SNF8-213ENST00000514929 DCTN2Q13561 401 aaKnown RBP18.94■□□□□ 0.62
SNF8-213ENST00000514929 IDO2Q6ZQW0 420 aa18.94■□□□□ 0.62
SNF8-213ENST00000514929 S100A16Q96FQ6 103 aaKnown RBP18.94■□□□□ 0.62
SNF8-213ENST00000514929 RHOVQ96L33 236 aa18.94■□□□□ 0.62
SNF8-213ENST00000514929 PHB2Q99623 299 aa18.94■□□□□ 0.62
SNF8-213ENST00000514929 H3BUA1 57 aa18.93■□□□□ 0.62
SNF8-213ENST00000514929 IGLV2-14P01704 120 aa18.93■□□□□ 0.62
SNF8-213ENST00000514929 FCER2P06734 321 aa18.93■□□□□ 0.62
SNF8-213ENST00000514929 PTHLHP12272 177 aa18.93■□□□□ 0.62
SNF8-213ENST00000514929 INSL3P51460 131 aa18.93■□□□□ 0.62
SNF8-213ENST00000514929 RPL30P62888 115 aaKnown RBP18.93■□□□□ 0.62
SNF8-213ENST00000514929 TNXAQ16473 311 aa18.93■□□□□ 0.62
SNF8-213ENST00000514929 PRSS8Q16651 343 aa18.93■□□□□ 0.62
SNF8-213ENST00000514929 ACOT12Q8WYK0 555 aa18.93■□□□□ 0.62
SNF8-213ENST00000514929 DLX4Q92988 240 aaPredicted RBP18.93■□□□□ 0.62
SNF8-213ENST00000514929 HSD17B10Q99714 261 aaKnown RBP18.93■□□□□ 0.62
SNF8-213ENST00000514929 XRCC3O43542 346 aa18.92■□□□□ 0.62
SNF8-213ENST00000514929 HSPB1P04792 205 aaKnown RBP18.92■□□□□ 0.62
SNF8-213ENST00000514929 FCGR2CP31995 323 aa18.92■□□□□ 0.62
SNF8-213ENST00000514929 CBX5P45973 191 aa18.92■□□□□ 0.62
SNF8-213ENST00000514929 MRGPRG-AS1Q2M3A8 158 aa18.92■□□□□ 0.62
SNF8-213ENST00000514929 UBE2NLQ5JXB2 153 aa18.92■□□□□ 0.62
SNF8-213ENST00000514929 OVCH2Q7RTZ1 564 aa18.92■□□□□ 0.62
SNF8-213ENST00000514929 TCTEX1D2Q8WW35 142 aa18.92■□□□□ 0.62
SNF8-213ENST00000514929 C13orf42A0A1B0GVH6 325 aa18.91■□□□□ 0.62
SNF8-213ENST00000514929 MSGN1A6NI15 193 aa18.91■□□□□ 0.62
SNF8-213ENST00000514929 CREBL2O60519 120 aaPredicted RBP18.91■□□□□ 0.62
SNF8-213ENST00000514929 SAA1P0DJI8 122 aaPredicted RBP18.91■□□□□ 0.62
SNF8-213ENST00000514929 APELAP0DMC3 54 aa18.91■□□□□ 0.62
SNF8-213ENST00000514929 AADACP22760 399 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms