RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 RMND1Q9NWS8 449 aa-0.01□□□□□ -2.41
PDGFC-208ENST00000512711 MS4A12Q9NXJ0 267 aa-0.01□□□□□ -2.41
PDGFC-208ENST00000512711 NAT8Q9UHE5 227 aa-0.01□□□□□ -2.41
PDGFC-208ENST00000512711 SNX24Q9Y343 169 aa-0.01□□□□□ -2.41
PDGFC-208ENST00000512711 SNX10Q9Y5X0 201 aa-0.01□□□□□ -2.41
PDGFC-208ENST00000512711 GREB1Q4ZG55 1949 aa-0.01□□□□□ -2.41
PDGFC-208ENST00000512711 GLI3P10071 1580 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 PTPRZ1P23471 2315 aaPredicted RBP-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 CNTRLQ7Z7A1 2325 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 HERC2O95714 4834 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 FLT4P35916 1363 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 CHD5Q8TDI0 1954 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 TRAV7A0A075B6U4 112 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 A0A1B0GW15 77 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 RAB19A4D1S5 217 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 MEIS3P1A6NDR6 274 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 NDUFB2O95178 105 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 IGLV3-27P01718 113 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 CRYGCP07315 174 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 PSMB8P28062 276 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 OR10J1P30954 320 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 RPL28P46779 137 aaKnown RBP-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 PSMD7P51665 324 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 RBM11P57052 281 aaKnown RBP-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 FXYD7P58549 80 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 RAB14P61106 215 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 AP1S1P61966 158 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 RAB31Q13636 194 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 FLOT2Q14254 428 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 USF2Q15853 346 aaPredicted RBP-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 MIAQ16674 131 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 BSXQ3C1V8 233 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 MESTQ5EB52 335 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 C10orf55Q5SWW7 151 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 AHSA2Q719I0 299 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 C1orf174Q8IYL3 243 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 Q8N6K4 173 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 NATD1Q8N6N6 113 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 C9orf163Q8N9P6 203 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 ACBD4Q8NC06 268 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 OR51H1Q8NH63 302 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 TNFAIP8L1Q8WVP5 186 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 PATE1Q8WXA2 126 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 TAMM41Q96BW9 452 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 LRRC45Q96CN5 670 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 HINT2Q9BX68 163 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 EIF5A2Q9GZV4 153 aaKnown RBP-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 TMEM222Q9H0R3 208 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 COMMD9Q9P000 198 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 CLEC2DQ9UHP7 191 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 PSME2Q9UL46 239 aa-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 RBM7Q9Y580 266 aaKnown RBP-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 CHD2O14647 1828 aaKnown RBP-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 SYNE1Q8NF91 8797 aaKnown RBP-0.02□□□□□ -2.41
PDGFC-208ENST00000512711 ZFYVE26Q68DK2 2539 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 KMT2AQ03164 3969 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 IGF2RP11717 2491 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 SONP18583 2426 aaKnown RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 HIVEP3Q5T1R4 2406 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 PTPRSQ13332 1948 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 ASCC3Q8N3C0 2202 aaKnown RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 BIRC6Q9NR09 4857 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 BDP1A6H8Y1 2624 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 STARD9Q9P2P6 4700 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 STAB2Q8WWQ8 2551 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 A0A087WX48 190 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 A0A0J9YW62 118 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 GOLGA6L7A0A1B0GV03 622 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 TMEM269A0A1B0GVZ9 245 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 IBA57-AS1B1ANH7 110 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 GOLGA8RI6L899 631 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 SDCBPO00560 298 aaPredicted RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 CRXO43186 299 aaPredicted RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 ATP8B1O43520 1251 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 MPZL2O60487 215 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 SNAI1O95863 264 aaPredicted RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 HBZP02008 142 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 TFPTP0C1Z6 253 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 PTNP21246 168 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 CCNOP22674 350 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 F8A1P23610 371 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 CALRP27797 417 aaKnown RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 AGTR1P30556 359 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 ZNF93P35789 620 aaPredicted RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 CRATP43155 626 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 TMEM33P57088 247 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 HIST1H4AP62805 103 aaKnown RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 BTN3A2P78410 334 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 RUNX1Q01196 453 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 KRTAP20-1Q3LI63 56 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 SPATA24Q86W54 205 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 LRRC6Q86X45 466 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 C10orf67Q8IYJ2 551 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 ZNF676Q8N7Q3 588 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 ZNF321PQ8N8H1 164 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 C12orf29Q8N999 325 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 CDRT4Q8N9R6 151 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 OR5B17Q8NGF7 314 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 OR8B3Q8NGG8 313 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 OR52K2Q8NGK3 314 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms