RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 MSRB1Q9NZV6 116 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 WASHC3Q9Y3C0 194 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 TMEM72A0PK05 275 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 DUS4LO95620 317 aaKnown RBP5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 IGHV3-9P01782 118 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 HLA-DQB2P05538 268 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 CD48P09326 243 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 MYL9P24844 172 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 LMO4P61968 165 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 ZNF155Q12901 538 aaPredicted RBP5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 MSMPQ1L6U9 139 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 C6orf52Q5T4I8 152 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 LYPD4Q6UWN0 246 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 ANKRD29Q8N6D5 301 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 PRO1933Q9H354 126 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 NOX3Q9HBY0 568 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 KCNE3Q9Y6H6 103 aa5.97□□□□□ -1.45
PDGFRA-206ENST00000508170 TMED7-TICAM2A0A0A6YYA0 188 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 TRAV8-6A0A0B4J262 113 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 C5orf49A4QMS7 147 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 FAM183AA6NL82 134 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 KNCNA6PVL3 124 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 CLDN25C9JDP6 229 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 LINC00694P0DN24 101 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 S100A2P29034 98 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 S100A10P60903 97 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 HERV-K104P61576 105 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 LAMTOR4Q0VGL1 99 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 FABP9Q0Z7S8 132 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 OR8S1Q8NH09 359 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 OR4C3Q8NH37 302 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 OR2M4Q96R27 311 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 F2RL3Q96RI0 385 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 NRIP2Q9BQI9 281 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 SLC25A31Q9H0C2 315 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 PARP11Q9NR21 331 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 KCNIP2Q9NS61 270 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 NAT8Q9UHE5 227 aa5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 TDRD15B5MCY1 1934 aaKnown RBP5.96□□□□□ -1.46
PDGFRA-206ENST00000508170 TRBV5-4A0A0C4DH59 114 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 DHRS12A0PJE2 317 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 UPK1AO00322 258 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 CT45A10P0DMU9 189 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 GABRA3P34903 492 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 GNG4P50150 75 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 FZD2Q14332 565 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 TCF23Q7RTU1 214 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 C1QL2Q7Z5L3 287 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 DEFB107AQ8IZN7 70 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 SMRP1Q8NCR6 262 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 OR51A4Q8NGJ6 313 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 PP6455Q8WZ26 134 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 CCL17Q92583 94 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 RBM12B-AS1Q9P1G2 102 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 POMPQ9Y244 141 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 TP53BP1Q12888 1972 aaPredicted RBP5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 hCG_1818297A0A087WSY0 165 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 A8MT66 165 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 TBL1XO60907 577 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 FCGR3AP08637 254 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 MFAP2P55001 183 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 DAD1P61803 113 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 MMDQ15546 238 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 ZNF404Q494X3 552 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 ZFP69Q49AA0 526 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 LINC00242Q5T6M2 205 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 BCL2L15Q5TBC7 163 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 KDM4DQ6B0I6 523 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 SCGB1D4Q6XE38 83 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 CDC20BQ86Y33 519 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 SLAMF6Q96DU3 332 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 SIGLEC12Q96PQ1 595 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 NAA38Q9BRA0 125 aaKnown RBP5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 ZNF226Q9NYT6 803 aa5.95□□□□□ -1.46
PDGFRA-206ENST00000508170 TNFSF12O43508 249 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 BCL2L11O43521 198 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 SNAPC5O75971 98 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 PROSCO94903 275 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 ENDOGQ14249 297 aaKnown RBP5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 KLF17Q5JT82 389 aaPredicted RBP5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 LCN8Q6JVE9 175 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 FOXL2NBQ6ZUU3 175 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 DCAF4L2Q8NA75 395 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 DERL3Q96Q80 235 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 PRSS27Q9BQR3 290 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 EXOSC3Q9NQT5 275 aaKnown RBP5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 NFASCO94856 1347 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 WI2-2373I1.2A0A1W2PRP0 233 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 H0Y9J4 135 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 NDUFS5O43920 106 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 LMX1BO60663 402 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 FAM20BO75063 409 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 HLA-DRB1P01911 266 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 MAS1P04201 325 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 NHLRC4P0CG21 123 aaPredicted RBP5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 IGHV4-30-4P0DP06 118 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 FABP5Q01469 135 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 Q5XG85 94 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 GTF2H5Q6ZYL4 71 aa5.94□□□□□ -1.46
PDGFRA-206ENST00000508170 RBMXL3Q8N7X1 1067 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms