RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 C19orf73Q9NVV2 129 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 COA4Q9NYJ1 87 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 ZNF230Q9UIE0 474 aaPredicted RBP8.82□□□□□ -1
HMGCS1-204ENST00000507293 ADAM30Q9UKF2 790 aa8.82□□□□□ -1
HMGCS1-204ENST00000507293 RBM7Q9Y580 266 aaKnown RBP8.82□□□□□ -1
HMGCS1-204ENST00000507293 SHISA3A0PJX4 238 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 SRRM4A7MD48 611 aaKnown RBP8.81□□□□□ -1
HMGCS1-204ENST00000507293 A8MZ25 164 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 PDCD5O14737 125 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 ATP6V1G2O95670 118 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 TRBV12-3P01733 135 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 APELAP0DMC3 54 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 HIST1H1DP16402 221 aaKnown RBP8.81□□□□□ -1
HMGCS1-204ENST00000507293 AADACP22760 399 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 GADD45AP24522 165 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 HSPA13P48723 471 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 PSMD7P51665 324 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 DYRK1AQ13627 763 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 SSX1Q16384 188 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 VMA21Q3ZAQ7 101 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 IL34Q6ZMJ4 242 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 TMEM68Q96MH6 324 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 GINS4Q9BRT9 223 aa8.81□□□□□ -1
HMGCS1-204ENST00000507293 PEF1Q9UBV8 284 aaKnown RBP8.81□□□□□ -1
HMGCS1-204ENST00000507293 RRP15Q9Y3B9 282 aaKnown RBP8.81□□□□□ -1
HMGCS1-204ENST00000507293 TNCP24821 2201 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 A0A0B4J203 849 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 IFITM5A6NNB3 132 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 RAB27BO00194 218 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 RBMXL2O75526 392 aaKnown RBP8.8□□□□□ -1
HMGCS1-204ENST00000507293 BRI3O95415 125 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 DIRAS3O95661 229 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 CRYZL1O95825 349 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 RRASP10301 218 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 MYL9P24844 172 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 UBE2KP61086 200 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 TAGLNQ01995 201 aaKnown RBP8.8□□□□□ -1
HMGCS1-204ENST00000507293 ARFRP1Q13795 201 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 TBCEQ15813 527 aaPredicted RBP8.8□□□□□ -1
HMGCS1-204ENST00000507293 TNXAQ16473 311 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 ZFAND6Q6FIF0 208 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 ZNF343Q6P1L6 599 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 IDO2Q6ZQW0 420 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 ZNF367Q7RTV3 350 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 H1FOOQ8IZA3 346 aaPredicted RBP8.8□□□□□ -1
HMGCS1-204ENST00000507293 TEX45Q8NA69 505 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 ADAD2Q8NCV1 583 aaKnown RBP8.8□□□□□ -1
HMGCS1-204ENST00000507293 DDB2Q92466 427 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 ADTRPQ96IZ2 230 aa8.8□□□□□ -1
HMGCS1-204ENST00000507293 DYNC2H1Q8NCM8 4307 aaKnown RBP8.8□□□□□ -1
HMGCS1-204ENST00000507293 IGKV1D-8A0A087WSZ0 117 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 TRAV1-2A0A0B4J238 106 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 MSGN1A6NI15 193 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 LINC00473A8K010 186 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 H0Y980 276 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 CSN3P07498 182 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 OR9G9P0C7N8 305 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 RAB6AP20340 208 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 DUTP33316 252 aaKnown RBP8.79□□□□□ -1
HMGCS1-204ENST00000507293 TALDO1P37837 337 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 PRSS8Q16651 343 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 RPEL1Q2QD12 228 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 SRSF12Q8WXF0 261 aaKnown RBP8.79□□□□□ -1
HMGCS1-204ENST00000507293 ACOT12Q8WYK0 555 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 USMG5Q96IX5 58 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 EDA2RQ9HAV5 297 aa8.79□□□□□ -1
HMGCS1-204ENST00000507293 GAR1Q9NY12 217 aaKnown RBP8.79□□□□□ -1
HMGCS1-204ENST00000507293 LCE6AA0A183 80 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 SMIM30A4D0T7 59 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 J3QRK9 145 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 MPPED1O15442 326 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 PRH1P02810 166 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 RAB3BP20337 219 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 RHOGP84095 191 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 TATDN3Q17R31 274 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 LCN12Q6JVE5 192 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 Q6ZS49 121 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 OSR1Q8TAX0 266 aaPredicted RBP8.78□□□□□ -1
HMGCS1-204ENST00000507293 ISOC1Q96CN7 298 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 CNBD2Q96M20 576 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 SPATA25Q9BR10 227 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 THAP7Q9BT49 309 aaPredicted RBP8.78□□□□□ -1
HMGCS1-204ENST00000507293 ATG5Q9H1Y0 275 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 NDUFB11Q9NX14 153 aa8.78□□□□□ -1
HMGCS1-204ENST00000507293 ELF5Q9UKW6 265 aaPredicted RBP8.78□□□□□ -1
HMGCS1-204ENST00000507293 TRDV1A0A1B0GX56 115 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 IZUMO1RA6ND01 250 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 METTL21EPA6NDL7 271 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 FCGR3BO75015 233 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 OR2A4O95047 310 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 SAA1P0DJI8 122 aaPredicted RBP8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 ZNF45Q02386 682 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 EXOSC2Q13868 293 aaKnown RBP8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 HAGHQ16775 308 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 OR2B11Q5JQS5 317 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 C10orf55Q5SWW7 151 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 IZUMO2Q6UXV1 221 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 GTSCR1Q86UQ5 136 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 NR2C2APQ86WQ0 139 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 Q8N402 240 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms