RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 REC114Q7Z4M0 266 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 ARPC1AQ92747 370 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 UBE2E2Q96LR5 201 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 NECAP2Q9NVZ3 263 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 RBMX2Q9Y388 322 aaKnown RBP12.12□□□□□ -0.47
MED28-204ENST00000506409 NUBP2Q9Y5Y2 271 aa12.12□□□□□ -0.47
MED28-204ENST00000506409 MEIS3P1A6NDR6 274 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 SOX15O60248 233 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 FCGR2CP31995 323 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 RAB9AP51151 201 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 GNB1P62873 340 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 FXYD3Q14802 87 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 AKIRIN2Q53H80 203 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 ACTBL2Q562R1 376 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 UNQ5815/PRO19632Q6UWF5 114 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 KCTD9Q7L273 389 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 ZNF491Q8N8L2 437 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 LFNGQ8NES3 379 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 GRPEL2Q8TAA5 225 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 SNAPC3Q92966 411 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 MCRIP2Q9BUT9 160 aaKnown RBP12.11□□□□□ -0.47
MED28-204ENST00000506409 GPR61Q9BZJ8 451 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 IFT46Q9NQC8 304 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 COMMD3Q9UBI1 195 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 VSIG4Q9Y279 399 aa12.11□□□□□ -0.47
MED28-204ENST00000506409 SRRM4A7MD48 611 aaKnown RBP12.1□□□□□ -0.47
MED28-204ENST00000506409 CNIH1O95406 144 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 IGLV2-14P01704 120 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 CRYGBP07316 175 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 TAS2R20P59543 309 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 PJVKQ0ZLH3 352 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 KIAA0141Q14154 515 aaPredicted RBP12.1□□□□□ -0.47
MED28-204ENST00000506409 VMA21Q3ZAQ7 101 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 PYHIN1Q6K0P9 492 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 ANKRD13BQ86YJ7 626 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 OR5M8Q8NGP6 311 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 OSR1Q8TAX0 266 aaPredicted RBP12.1□□□□□ -0.47
MED28-204ENST00000506409 CASTOR1Q8WTX7 329 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 MRPS26Q9BYN8 205 aaKnown RBP12.1□□□□□ -0.47
MED28-204ENST00000506409 NAA50Q9GZZ1 169 aaKnown RBP12.1□□□□□ -0.47
MED28-204ENST00000506409 GNB4Q9HAV0 340 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 MRPS7Q9Y2R9 242 aaKnown RBP12.1□□□□□ -0.47
MED28-204ENST00000506409 PRELID3BQ9Y3B1 194 aa12.1□□□□□ -0.47
MED28-204ENST00000506409 ARPC1BO15143 372 aaKnown RBP12.09□□□□□ -0.47
MED28-204ENST00000506409 FCGR3BO75015 233 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 GABARAPO95166 117 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 PPYP01298 95 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 EIF4EP06730 217 aaKnown RBP12.09□□□□□ -0.47
MED28-204ENST00000506409 AADACP22760 399 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 CD40LGP29965 261 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 RORCP51449 518 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 UBE2KP61086 200 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 RPL30P62888 115 aaKnown RBP12.09□□□□□ -0.47
MED28-204ENST00000506409 CTF1Q16619 201 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 OR2B11Q5JQS5 317 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 GPR107Q5VW38 600 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 OVCH2Q7RTZ1 564 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 OR11H1Q8NG94 326 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 OR5AP2Q8NGF4 316 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 SECTM1Q8WVN6 248 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 ACOT12Q8WYK0 555 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 DPF1Q92782 380 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 OR5B12Q96R08 314 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 HSD17B10Q99714 261 aaKnown RBP12.09□□□□□ -0.47
MED28-204ENST00000506409 DCUN1D5Q9BTE7 237 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 TAS2R8Q9NYW2 309 aa12.09□□□□□ -0.47
MED28-204ENST00000506409 SMIM31A0A1B0GVY4 71 aa12.08□□□□□ -0.48
MED28-204ENST00000506409 I3L521 148 aa12.08□□□□□ -0.48
MED28-204ENST00000506409 APOA1P02647 267 aa12.08□□□□□ -0.48
MED28-204ENST00000506409 SSBP2P81877 361 aaPredicted RBP12.08□□□□□ -0.48
MED28-204ENST00000506409 RUNX1Q01196 453 aa12.08□□□□□ -0.48
MED28-204ENST00000506409 FHL3Q13643 280 aa12.08□□□□□ -0.48
MED28-204ENST00000506409 CDK10Q15131 360 aa12.08□□□□□ -0.48
MED28-204ENST00000506409 IDO2Q6ZQW0 420 aa12.08□□□□□ -0.48
MED28-204ENST00000506409 TEX45Q8NA69 505 aa12.08□□□□□ -0.48
MED28-204ENST00000506409 TCTEX1D2Q8WW35 142 aa12.08□□□□□ -0.48
MED28-204ENST00000506409 CMTM3Q96MX0 182 aa12.08□□□□□ -0.48
MED28-204ENST00000506409 AURKAIP1Q9NWT8 199 aaPredicted RBP12.08□□□□□ -0.48
MED28-204ENST00000506409 PRKDCP78527 4128 aaKnown RBP12.07□□□□□ -0.48
MED28-204ENST00000506409 SAA1P0DJI8 122 aaPredicted RBP12.07□□□□□ -0.48
MED28-204ENST00000506409 HOXD3P31249 432 aaPredicted RBP12.07□□□□□ -0.48
MED28-204ENST00000506409 PRSS3P35030 304 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 FXYD4P59646 89 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 EIF4EBP1Q13541 118 aaPredicted RBP12.07□□□□□ -0.48
MED28-204ENST00000506409 ZNF66Q6ZN08 573 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 GPR141Q7Z602 305 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 OR1N2Q8NGR9 330 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 OR4S2Q8NH73 311 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 GIMAP1Q8WWP7 306 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 MS4A10Q96PG2 267 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 SLC5A7Q9GZV3 580 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 SLA2Q9H6Q3 261 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 CCL28Q9NRJ3 127 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 EHFQ9NZC4 300 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 ANAPC10Q9UM13 185 aa12.07□□□□□ -0.48
MED28-204ENST00000506409 TNFSF12O43508 249 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 HPGDSO60760 199 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 OR8U8P0C7N1 319 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 ALDH3B2P48448 385 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 TPPP2P59282 170 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms