RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 VSIG4Q9Y279 399 aa16.53■□□□□ 0.24
TRAPPC11-203ENST00000504526 A0A1W2PN81 502 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 LINC00473A8K010 186 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 CRYGBP07316 175 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 EGR2P11161 476 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 CD40LGP29965 261 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 CHRNA7P36544 502 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 RAB9AP51151 201 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 RORCP51449 518 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 FXYD3Q14802 87 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 MSMO1Q15800 293 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 KCTD9Q7L273 389 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 TEX45Q8NA69 505 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 OR5AP2Q8NGF4 316 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 OR5M8Q8NGP6 311 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 RAX2Q96IS3 184 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 HSD17B10Q99714 261 aaKnown RBP16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 COMMD3Q9UBI1 195 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 MRPS7Q9Y2R9 242 aaKnown RBP16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 A3GALT2U3KPV4 340 aa16.52■□□□□ 0.24
TRAPPC11-203ENST00000504526 IGKV1D-13A0A0B4J2D9 117 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 SMIM31A0A1B0GVY4 71 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 CRYZL1O95825 349 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 APOA1P02647 267 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 IGKV1-13P0DP09 117 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 PTHLHP12272 177 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 FCGR2CP31995 323 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 UNQ5815/PRO19632Q6UWF5 114 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 OVCH2Q7RTZ1 564 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 ZNF491Q8N8L2 437 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 SNAPC3Q92966 411 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 KLK15Q9H2R5 256 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 TPSG1Q9NRR2 321 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 CMYA5Q8N3K9 4069 aa16.51■□□□□ 0.23
TRAPPC11-203ENST00000504526 FCGR3BO75015 233 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 CNIH1O95406 144 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 IGLV2-14P01704 120 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 UBE2KP61086 200 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 RUNX1Q01196 453 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 KIAA0141Q14154 515 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 CDK10Q15131 360 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 CTF1Q16619 201 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 ACTBL2Q562R1 376 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 FOXB2Q5VYV0 432 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 MZT2AQ6P582 158 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 ZNF66Q6ZN08 573 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 LFNGQ8NES3 379 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 GIMAP1Q8WWP7 306 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 AP3S1Q92572 193 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 DPF1Q92782 380 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 TMEM68Q96MH6 324 aa16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 FAM103A1Q9BTL3 118 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-203ENST00000504526 SRRM4A7MD48 611 aaKnown RBP16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 SOX15O60248 233 aa16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 CREBL2O60519 120 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 PPYP01298 95 aa16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 AADACP22760 399 aa16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 PRSS3P35030 304 aa16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 ALDH3B2P48448 385 aa16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 GPR107Q5VW38 600 aa16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 GPR141Q7Z602 305 aa16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 ZBTB34Q8NCN2 500 aa16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 GRPEL2Q8TAA5 225 aa16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 DUX3Q96PT4 197 aa16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 ANAPC10Q9UM13 185 aa16.49■□□□□ 0.23
TRAPPC11-203ENST00000504526 EIF4EP06730 217 aaKnown RBP16.48■□□□□ 0.23
TRAPPC11-203ENST00000504526 DEFB136Q30KP8 78 aa16.48■□□□□ 0.23
TRAPPC11-203ENST00000504526 OR4S2Q8NH73 311 aa16.48■□□□□ 0.23
TRAPPC11-203ENST00000504526 SECTM1Q8WVN6 248 aa16.48■□□□□ 0.23
TRAPPC11-203ENST00000504526 TCTEX1D2Q8WW35 142 aa16.48■□□□□ 0.23
TRAPPC11-203ENST00000504526 BORCS5Q969J3 196 aa16.48■□□□□ 0.23
TRAPPC11-203ENST00000504526 DCUN1D5Q9BTE7 237 aa16.48■□□□□ 0.23
TRAPPC11-203ENST00000504526 NAA50Q9GZZ1 169 aaKnown RBP16.48■□□□□ 0.23
TRAPPC11-203ENST00000504526 SLA2Q9H6Q3 261 aa16.48■□□□□ 0.23
TRAPPC11-203ENST00000504526 MEIS3P1A6NDR6 274 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 H3BUA1 57 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 I3L521 148 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 ARPC1BO15143 372 aaKnown RBP16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 FCER2P06734 321 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 KIR2DS2P43631 304 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 RAB25P57735 213 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 TAS2R46P59540 309 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 GNB1P62873 340 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 RPL30P62888 115 aaKnown RBP16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 EIF4EBP1Q13541 118 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 FHL3Q13643 280 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 MFSD4AQ8N468 514 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 OR11H1Q8NG94 326 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 GNB4Q9HAV0 340 aa16.47■□□□□ 0.23
TRAPPC11-203ENST00000504526 OR8U8P0C7N1 319 aa16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 ZNF182P17025 639 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 NAT1P18440 290 aa16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 SSBP2P81877 361 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 PJVKQ0ZLH3 352 aa16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 PRSS8Q16651 343 aa16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 VSTM2AQ8TAG5 236 aa16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 SLC5A7Q9GZV3 580 aa16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 SCPEP1Q9HB40 452 aa16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 CCL28Q9NRJ3 127 aa16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 TAS2R8Q9NYW2 309 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms