RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 RPL30P62888 115 aaKnown RBP8.84□□□□□ -0.99
VCAN-205ENST00000503923 ZNF45Q02386 682 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 CATR1Q13166 79 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 TMEM177Q53S58 311 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 AADACL3Q5VUY0 350 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 Q6ZS46 218 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 LHFPL1Q86WI0 220 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 SLC38A6Q8IZM9 456 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 TOMM5Q8N4H5 51 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 C3orf56Q8N813 242 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 GDPD1Q8N9F7 314 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 OR4C16Q8NGL9 310 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 PTTG2Q9NZH5 202 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 SIGLEC9Q9Y336 463 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 RRHO14718 337 aa8.83□□□□□ -1
VCAN-205ENST00000503923 SHOXO15266 292 aa8.83□□□□□ -1
VCAN-205ENST00000503923 PEX14O75381 377 aa8.83□□□□□ -1
VCAN-205ENST00000503923 CRYZL1O95825 349 aa8.83□□□□□ -1
VCAN-205ENST00000503923 ZNF735P0CB33 412 aa8.83□□□□□ -1
VCAN-205ENST00000503923 FAUP35544 74 aaKnown RBP8.83□□□□□ -1
VCAN-205ENST00000503923 ECI1P42126 302 aa8.83□□□□□ -1
VCAN-205ENST00000503923 LGALS7P47929 136 aa8.83□□□□□ -1
VCAN-205ENST00000503923 C5orf64Q2M2E5 130 aa8.83□□□□□ -1
VCAN-205ENST00000503923 SCGB2B2Q4G0G5 96 aa8.83□□□□□ -1
VCAN-205ENST00000503923 FAAP20Q6NZ36 180 aa8.83□□□□□ -1
VCAN-205ENST00000503923 OR4S2Q8NH73 311 aa8.83□□□□□ -1
VCAN-205ENST00000503923 TERB2Q8NHR7 220 aa8.83□□□□□ -1
VCAN-205ENST00000503923 OSR1Q8TAX0 266 aaPredicted RBP8.83□□□□□ -1
VCAN-205ENST00000503923 DEDD2Q8WXF8 326 aa8.83□□□□□ -1
VCAN-205ENST00000503923 HARBI1Q96MB7 349 aa8.83□□□□□ -1
VCAN-205ENST00000503923 PRRT1Q99946 306 aa8.83□□□□□ -1
VCAN-205ENST00000503923 RSRP1Q9BUV0 290 aa8.83□□□□□ -1
VCAN-205ENST00000503923 SERTAD4Q9NUC0 356 aa8.83□□□□□ -1
VCAN-205ENST00000503923 HAX1O00165 279 aa8.82□□□□□ -1
VCAN-205ENST00000503923 KCNAB3O43448 404 aa8.82□□□□□ -1
VCAN-205ENST00000503923 PGLYRP1O75594 196 aaPredicted RBP8.82□□□□□ -1
VCAN-205ENST00000503923 IGHG2P01859 326 aa8.82□□□□□ -1
VCAN-205ENST00000503923 HLA-DRB1P01911 266 aa8.82□□□□□ -1
VCAN-205ENST00000503923 PGAM2P15259 253 aa8.82□□□□□ -1
VCAN-205ENST00000503923 PPP5CP53041 499 aa8.82□□□□□ -1
VCAN-205ENST00000503923 KLF9Q13886 244 aaPredicted RBP8.82□□□□□ -1
VCAN-205ENST00000503923 PLGLAQ15195 96 aa8.82□□□□□ -1
VCAN-205ENST00000503923 PSG5Q15238 335 aa8.82□□□□□ -1
VCAN-205ENST00000503923 TMEM95Q3KNT9 176 aa8.82□□□□□ -1
VCAN-205ENST00000503923 OR2B11Q5JQS5 317 aa8.82□□□□□ -1
VCAN-205ENST00000503923 TRIQKQ629K1 86 aa8.82□□□□□ -1
VCAN-205ENST00000503923 LIN54Q6MZP7 749 aa8.82□□□□□ -1
VCAN-205ENST00000503923 SLC35E3Q7Z769 313 aa8.82□□□□□ -1
VCAN-205ENST00000503923 FOXRED2Q8IWF2 684 aa8.82□□□□□ -1
VCAN-205ENST00000503923 POC5Q8NA72 575 aa8.82□□□□□ -1
VCAN-205ENST00000503923 OR51H1Q8NH63 302 aa8.82□□□□□ -1
VCAN-205ENST00000503923 CD300LFQ8TDQ1 290 aa8.82□□□□□ -1
VCAN-205ENST00000503923 WFDC12Q8WWY7 111 aa8.82□□□□□ -1
VCAN-205ENST00000503923 S100ZQ8WXG8 99 aa8.82□□□□□ -1
VCAN-205ENST00000503923 ZNF486Q96H40 463 aaPredicted RBP8.82□□□□□ -1
VCAN-205ENST00000503923 GPHA2Q96T91 129 aa8.82□□□□□ -1
VCAN-205ENST00000503923 ZNF747Q9BV97 191 aa8.82□□□□□ -1
VCAN-205ENST00000503923 AKIP1Q9NQ31 210 aa8.82□□□□□ -1
VCAN-205ENST00000503923 MCUBQ9NWR8 336 aa8.82□□□□□ -1
VCAN-205ENST00000503923 SLC2A8Q9NY64 477 aa8.82□□□□□ -1
VCAN-205ENST00000503923 SCP2D1Q9UJQ7 156 aa8.82□□□□□ -1
VCAN-205ENST00000503923 SRRM4A7MD48 611 aaKnown RBP8.81□□□□□ -1
VCAN-205ENST00000503923 RBFOX2O43251 390 aaKnown RBP eCLIP8.81□□□□□ -1
VCAN-205ENST00000503923 SLC25A17O43808 307 aa8.81□□□□□ -1
VCAN-205ENST00000503923 IGLV2-23P01705 113 aa8.81□□□□□ -1
VCAN-205ENST00000503923 RLN1P04808 185 aa8.81□□□□□ -1
VCAN-205ENST00000503923 VSIG10L2P0DP72 767 aa8.81□□□□□ -1
VCAN-205ENST00000503923 INPP1P49441 399 aa8.81□□□□□ -1
VCAN-205ENST00000503923 SURF2Q15527 256 aaPredicted RBP8.81□□□□□ -1
VCAN-205ENST00000503923 BAK1Q16611 211 aa8.81□□□□□ -1
VCAN-205ENST00000503923 VMA21Q3ZAQ7 101 aa8.81□□□□□ -1
VCAN-205ENST00000503923 PHLDA2Q53GA4 152 aa8.81□□□□□ -1
VCAN-205ENST00000503923 ZNF57Q68EA5 555 aaPredicted RBP8.81□□□□□ -1
VCAN-205ENST00000503923 SPAG16Q8N0X2 631 aa8.81□□□□□ -1
VCAN-205ENST00000503923 KLHDC1Q8N7A1 406 aa8.81□□□□□ -1
VCAN-205ENST00000503923 OR51S1Q8NGJ8 323 aa8.81□□□□□ -1
VCAN-205ENST00000503923 ZFAND1Q8TCF1 268 aa8.81□□□□□ -1
VCAN-205ENST00000503923 SDHCQ99643 169 aaPredicted RBP8.81□□□□□ -1
VCAN-205ENST00000503923 WNT10AQ9GZT5 417 aa8.81□□□□□ -1
VCAN-205ENST00000503923 FBXL15Q9H469 300 aa8.81□□□□□ -1
VCAN-205ENST00000503923 HRASLSQ9HDD0 168 aa8.81□□□□□ -1
VCAN-205ENST00000503923 SLC2A9Q9NRM0 540 aa8.81□□□□□ -1
VCAN-205ENST00000503923 METTL1Q9UBP6 276 aaKnown RBP8.81□□□□□ -1
VCAN-205ENST00000503923 STAB1Q9NY15 2570 aa8.8□□□□□ -1
VCAN-205ENST00000503923 DNHD1Q96M86 4753 aa8.8□□□□□ -1
VCAN-205ENST00000503923 AP4M1O00189 453 aa8.8□□□□□ -1
VCAN-205ENST00000503923 RAMP3O60896 148 aa8.8□□□□□ -1
VCAN-205ENST00000503923 HPRT1P00492 218 aa8.8□□□□□ -1
VCAN-205ENST00000503923 CRYGBP07316 175 aa8.8□□□□□ -1
VCAN-205ENST00000503923 BRWD1-AS2P59051 145 aa8.8□□□□□ -1
VCAN-205ENST00000503923 UBE2KP61086 200 aa8.8□□□□□ -1
VCAN-205ENST00000503923 RND3P61587 244 aa8.8□□□□□ -1
VCAN-205ENST00000503923 IDO2Q6ZQW0 420 aa8.8□□□□□ -1
VCAN-205ENST00000503923 TBC1D26Q86UD7 250 aa8.8□□□□□ -1
VCAN-205ENST00000503923 PPP1R27Q86WC6 154 aa8.8□□□□□ -1
VCAN-205ENST00000503923 TCTEX1D1Q8N7M0 179 aa8.8□□□□□ -1
VCAN-205ENST00000503923 TEX45Q8NA69 505 aa8.8□□□□□ -1
VCAN-205ENST00000503923 OR13C8Q8NGS7 320 aa8.8□□□□□ -1
VCAN-205ENST00000503923 MARCH1Q8TCQ1 289 aa8.8□□□□□ -1
VCAN-205ENST00000503923 SCGB3A2Q96PL1 93 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms