RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 OR4D10Q8NGI6 311 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 TSNAXQ99598 290 aaKnown RBP19.85■□□□□ 0.77
LSM6-202ENST00000502781 TAS2R8Q9NYW2 309 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 KIAA1456Q9P272 454 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 UCP3P55916 312 aa19.84■□□□□ 0.77
LSM6-202ENST00000502781 GPHA2Q96T91 129 aa19.84■□□□□ 0.77
LSM6-202ENST00000502781 HSPB9Q9BQS6 159 aa19.84■□□□□ 0.77
LSM6-202ENST00000502781 FBXL15Q9H469 300 aa19.84■□□□□ 0.77
LSM6-202ENST00000502781 PRELID3BQ9Y3B1 194 aa19.84■□□□□ 0.77
LSM6-202ENST00000502781 ANKRD20A5PA0PJZ0 165 aa19.83■□□□□ 0.77
LSM6-202ENST00000502781 LINC01548A6NM66 108 aa19.83■□□□□ 0.77
LSM6-202ENST00000502781 PEX14O75381 377 aa19.83■□□□□ 0.77
LSM6-202ENST00000502781 RAB3DO95716 219 aa19.83■□□□□ 0.77
LSM6-202ENST00000502781 IFNA6P05013 189 aa19.83■□□□□ 0.77
LSM6-202ENST00000502781 VSIG10L2P0DP72 767 aa19.83■□□□□ 0.77
LSM6-202ENST00000502781 SRRM4A7MD48 611 aaKnown RBP19.83■□□□□ 0.76
LSM6-202ENST00000502781 KCNAB3O43448 404 aa19.83■□□□□ 0.76
LSM6-202ENST00000502781 TNFSF12O43508 249 aa19.83■□□□□ 0.76
LSM6-202ENST00000502781 CRYZL1O95825 349 aa19.83■□□□□ 0.76
LSM6-202ENST00000502781 ZNF735P0CB33 412 aa19.83■□□□□ 0.76
LSM6-202ENST00000502781 CBX3Q13185 183 aa19.83■□□□□ 0.76
LSM6-202ENST00000502781 SPANXN2Q5MJ10 180 aa19.83■□□□□ 0.76
LSM6-202ENST00000502781 LIN54Q6MZP7 749 aa19.83■□□□□ 0.76
LSM6-202ENST00000502781 OSR1Q8TAX0 266 aaPredicted RBP19.83■□□□□ 0.76
LSM6-202ENST00000502781 TCTEX1D2Q8WW35 142 aa19.83■□□□□ 0.76
LSM6-202ENST00000502781 TRIM63Q969Q1 353 aa19.83■□□□□ 0.76
LSM6-202ENST00000502781 HARBI1Q96MB7 349 aa19.83■□□□□ 0.76
LSM6-202ENST00000502781 THAP7Q9BT49 309 aaPredicted RBP19.83■□□□□ 0.76
LSM6-202ENST00000502781 FCGR3BO75015 233 aa19.82■□□□□ 0.76
LSM6-202ENST00000502781 CRYGBP07316 175 aa19.82■□□□□ 0.76
LSM6-202ENST00000502781 MEF2DQ14814 521 aa19.82■□□□□ 0.76
LSM6-202ENST00000502781 PYDC2Q56P42 97 aa19.82■□□□□ 0.76
LSM6-202ENST00000502781 Q8N402 240 aa19.82■□□□□ 0.76
LSM6-202ENST00000502781 BATF3Q9NR55 127 aa19.82■□□□□ 0.76
LSM6-202ENST00000502781 ZNF580Q9UK33 172 aa19.82■□□□□ 0.76
LSM6-202ENST00000502781 IGHV7-81A0A0B4J1V7 117 aa19.81■□□□□ 0.76
LSM6-202ENST00000502781 AP4M1O00189 453 aa19.81■□□□□ 0.76
LSM6-202ENST00000502781 GPR31O00270 319 aa19.81■□□□□ 0.76
LSM6-202ENST00000502781 SHOXO15266 292 aa19.81■□□□□ 0.76
LSM6-202ENST00000502781 RBFOX2O43251 390 aaKnown RBP eCLIP19.81■□□□□ 0.76
LSM6-202ENST00000502781 AKAIN1P0CW23 69 aa19.81■□□□□ 0.76
LSM6-202ENST00000502781 LPCAT3Q6P1A2 487 aa19.81■□□□□ 0.76
LSM6-202ENST00000502781 FOXRED2Q8IWF2 684 aa19.81■□□□□ 0.76
LSM6-202ENST00000502781 NOL4LQ96MY1 436 aaPredicted RBP19.81■□□□□ 0.76
LSM6-202ENST00000502781 RSRP1Q9BUV0 290 aa19.81■□□□□ 0.76
LSM6-202ENST00000502781 METTL1Q9UBP6 276 aaKnown RBP19.81■□□□□ 0.76
LSM6-202ENST00000502781 FCN1O00602 326 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 SLC25A17O43808 307 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 PGLYRP1O75594 196 aaPredicted RBP19.8■□□□□ 0.76
LSM6-202ENST00000502781 IGF1P05019 195 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 KIR2DS2P43631 304 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 CATR1Q13166 79 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 CNPY1Q3B7I2 92 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 CMTM1Q8IZ96 169 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 OR4C16Q8NGL9 310 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 OR4S2Q8NH73 311 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 TERB2Q8NHR7 220 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 CHPT1Q8WUD6 406 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 SRRQ9GZT4 340 aa19.8■□□□□ 0.76
LSM6-202ENST00000502781 OR2B11Q5JQS5 317 aa19.79■□□□□ 0.76
LSM6-202ENST00000502781 FAAP20Q6NZ36 180 aa19.79■□□□□ 0.76
LSM6-202ENST00000502781 SLC38A6Q8IZM9 456 aa19.79■□□□□ 0.76
LSM6-202ENST00000502781 STPG2Q8N412 459 aa19.79■□□□□ 0.76
LSM6-202ENST00000502781 OR51J1Q9H342 316 aa19.79■□□□□ 0.76
LSM6-202ENST00000502781 TPSG1Q9NRR2 321 aa19.79■□□□□ 0.76
LSM6-202ENST00000502781 PLXNB1O43157 2135 aa19.78■□□□□ 0.76
LSM6-202ENST00000502781 UBE2KP61086 200 aa19.78■□□□□ 0.76
LSM6-202ENST00000502781 CX3CL1P78423 397 aa19.78■□□□□ 0.76
LSM6-202ENST00000502781 PLGLAQ15195 96 aa19.78■□□□□ 0.76
LSM6-202ENST00000502781 CENPVQ7Z7K6 275 aaPredicted RBP19.78■□□□□ 0.76
LSM6-202ENST00000502781 SPAG16Q8N0X2 631 aa19.78■□□□□ 0.76
LSM6-202ENST00000502781 MRGPRFQ96AM1 343 aa19.78■□□□□ 0.76
LSM6-202ENST00000502781 LINC00527Q9UJ94 153 aa19.78■□□□□ 0.76
LSM6-202ENST00000502781 RAMP3O60896 148 aa19.77■□□□□ 0.76
LSM6-202ENST00000502781 NDPQ00604 133 aa19.77■□□□□ 0.76
LSM6-202ENST00000502781 KLF9Q13886 244 aaPredicted RBP19.77■□□□□ 0.76
LSM6-202ENST00000502781 MRGPRG-AS1Q2M3A8 158 aa19.77■□□□□ 0.76
LSM6-202ENST00000502781 C10orf99Q6UWK7 81 aa19.77■□□□□ 0.76
LSM6-202ENST00000502781 ZNF562Q6V9R5 426 aa19.77■□□□□ 0.76
LSM6-202ENST00000502781 LINC00299Q6ZSB3 139 aa19.77■□□□□ 0.76
LSM6-202ENST00000502781 PPP1R27Q86WC6 154 aa19.77■□□□□ 0.76
LSM6-202ENST00000502781 TEX45Q8NA69 505 aa19.77■□□□□ 0.76
LSM6-202ENST00000502781 OR5AU1Q8NGC0 362 aa19.77■□□□□ 0.76
LSM6-202ENST00000502781 OR51H1Q8NH63 302 aa19.77■□□□□ 0.76
LSM6-202ENST00000502781 RLN1P04808 185 aa19.76■□□□□ 0.75
LSM6-202ENST00000502781 VMA21Q3ZAQ7 101 aa19.76■□□□□ 0.75
LSM6-202ENST00000502781 TCTEX1D4Q5JR98 221 aa19.76■□□□□ 0.75
LSM6-202ENST00000502781 GDPD1Q8N9F7 314 aa19.76■□□□□ 0.75
LSM6-202ENST00000502781 CD300LFQ8TDQ1 290 aa19.76■□□□□ 0.75
LSM6-202ENST00000502781 ZNF486Q96H40 463 aaPredicted RBP19.76■□□□□ 0.75
LSM6-202ENST00000502781 SLC2A8Q9NY64 477 aa19.76■□□□□ 0.75
LSM6-202ENST00000502781 PSMB11A5LHX3 300 aa19.75■□□□□ 0.75
LSM6-202ENST00000502781 DISC1C4P0D8 188 aa19.75■□□□□ 0.75
LSM6-202ENST00000502781 FBXO24O75426 580 aa19.75■□□□□ 0.75
LSM6-202ENST00000502781 SAA1P0DJI8 122 aaPredicted RBP19.75■□□□□ 0.75
LSM6-202ENST00000502781 CD28P10747 220 aa19.75■□□□□ 0.75
LSM6-202ENST00000502781 CRIP2P52943 208 aaPredicted RBP19.75■□□□□ 0.75
LSM6-202ENST00000502781 SSBP2P81877 361 aaPredicted RBP19.75■□□□□ 0.75
LSM6-202ENST00000502781 CD83Q01151 205 aa19.75■□□□□ 0.75
LSM6-202ENST00000502781 CFHR3Q02985 330 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms