RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 NPCDR1Q9BY65 106 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 NCOR1P1Q9H4R4 102 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 URGCP-MRPS24S4R325 110 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 SPRY3O43610 288 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 CYB5R3P00387 301 aaPredicted RBP13.75□□□□□ -0.21
VCAN-204ENST00000502527 CXCL1P09341 107 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 OR9G9P0C7N8 305 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 TIMP3P35625 211 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 PSMB3P49720 205 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 EDDM3BP56851 147 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 LOXL3P58215 753 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 RPP30P78346 268 aaKnown RBP13.75□□□□□ -0.21
VCAN-204ENST00000502527 TFF3Q07654 80 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 PRAMEF5Q5TYX0 476 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 VHLLQ6RSH7 139 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 ZNRF1Q8ND25 227 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 OR4A16Q8NH70 328 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 PLPPR2Q96GM1 343 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 SLC25A22Q9H936 323 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 RAB9BQ9NP90 201 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 PRR14LQ5THK1 2151 aa13.75□□□□□ -0.21
VCAN-204ENST00000502527 INTS1Q8N201 2190 aaKnown RBP13.75□□□□□ -0.21
VCAN-204ENST00000502527 CACNA1DQ01668 2161 aa13.74□□□□□ -0.21
VCAN-204ENST00000502527 IGLV3-9A0A075B6K5 115 aa13.74□□□□□ -0.21
VCAN-204ENST00000502527 MDKP21741 143 aaPredicted RBP13.74□□□□□ -0.21
VCAN-204ENST00000502527 KIR2DS2P43631 304 aa13.74□□□□□ -0.21
VCAN-204ENST00000502527 SPCS3P61009 180 aa13.74□□□□□ -0.21
VCAN-204ENST00000502527 ERVK-16P61578 105 aa13.74□□□□□ -0.21
VCAN-204ENST00000502527 RPS16P62249 146 aaKnown RBP13.74□□□□□ -0.21
VCAN-204ENST00000502527 S100A12P80511 92 aa13.74□□□□□ -0.21
VCAN-204ENST00000502527 KIAA0141Q14154 515 aaPredicted RBP13.74□□□□□ -0.21
VCAN-204ENST00000502527 ZNF674Q2M3X9 581 aa13.74□□□□□ -0.21
VCAN-204ENST00000502527 SPRNQ5BIV9 151 aa13.74□□□□□ -0.21
VCAN-204ENST00000502527 ITLN1Q8WWA0 313 aa13.74□□□□□ -0.21
VCAN-204ENST00000502527 USF3Q68DE3 2245 aa13.74□□□□□ -0.21
VCAN-204ENST00000502527 C15orf62A8K5M9 175 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 CLDN34H7C241 214 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 CRYABP02511 175 aaKnown RBP13.73□□□□□ -0.21
VCAN-204ENST00000502527 SELENOVP59797 346 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 CD81P60033 236 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 RPRMLQ8N4K4 120 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 S1PR3Q99500 378 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 SFXN3Q9BWM7 321 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 MANBALQ9NQG1 85 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 CALYQ9NYX4 217 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 TGIF2-C20orf24A0A0A6YYL0 155 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 ITGB1BP1O14713 200 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 CYB5BO43169 146 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 NDUFS6O75380 124 aaKnown RBP13.73□□□□□ -0.21
VCAN-204ENST00000502527 GATA4P43694 442 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 RAB7AP51149 207 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 RPL39P5Q59GN2 51 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 WDR25Q64LD2 544 aaPredicted RBP13.73□□□□□ -0.21
VCAN-204ENST00000502527 OR52E5Q8NH55 327 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 IFI27L2Q9H2X8 130 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 NAT8Q9UHE5 227 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 GAB2Q9UQC2 676 aa13.73□□□□□ -0.21
VCAN-204ENST00000502527 TMEM250H0YL14 139 aa13.72□□□□□ -0.21
VCAN-204ENST00000502527 RND2P52198 227 aa13.72□□□□□ -0.21
VCAN-204ENST00000502527 ZNF134P52741 427 aa13.72□□□□□ -0.21
VCAN-204ENST00000502527 RTP5Q14D33 572 aa13.72□□□□□ -0.21
VCAN-204ENST00000502527 C1orf87Q8N0U7 546 aa13.72□□□□□ -0.21
VCAN-204ENST00000502527 ZNF251Q9BRH9 671 aa13.72□□□□□ -0.21
VCAN-204ENST00000502527 CTDSP1Q9GZU7 261 aa13.72□□□□□ -0.21
VCAN-204ENST00000502527 LOC400499M0QZD8 3231 aa13.72□□□□□ -0.21
VCAN-204ENST00000502527 HMGB3O15347 200 aaKnown RBP13.71□□□□□ -0.21
VCAN-204ENST00000502527 CD1BP29016 333 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 ACOT6Q3I5F7 207 aaPredicted RBP13.71□□□□□ -0.21
VCAN-204ENST00000502527 SSX9Q7RTT3 188 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 FAM222BQ8WU58 562 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 RAB24Q969Q5 203 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 SMIM7Q9BQ49 75 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 FAM234AQ9H0X4 552 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 TMPRSS5Q9H3S3 457 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 RNF7Q9UBF6 113 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 WDR83OSQ9Y284 106 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 SOX15O60248 233 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 CGB3P0DN86 165 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 CGB7P0DN87 165 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 TMEM241Q24JQ0 296 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 PDLIM3Q53GG5 364 aaPredicted RBP13.71□□□□□ -0.21
VCAN-204ENST00000502527 CYP2G1PQ6ZSU1 146 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 OR13D1Q8NGV5 346 aa13.71□□□□□ -0.21
VCAN-204ENST00000502527 CHD3Q12873 2000 aaKnown RBP13.71□□□□□ -0.22
VCAN-204ENST00000502527 KBTBD11O94819 623 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 IFNA10P01566 189 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 CEACAM8P31997 349 aaPredicted RBP13.7□□□□□ -0.22
VCAN-204ENST00000502527 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.7□□□□□ -0.22
VCAN-204ENST00000502527 OR4S2Q8NH73 311 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 Q8TCH9 128 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 SDSLQ96GA7 329 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 FAM210BQ96KR6 192 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 DIRC2Q96SL1 478 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 GGACTQ9BVM4 153 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 HEYLQ9NQ87 328 aaPredicted RBP13.7□□□□□ -0.22
VCAN-204ENST00000502527 HEATR1Q9H583 2144 aaKnown RBP13.7□□□□□ -0.22
VCAN-204ENST00000502527 PTPRBP23467 1997 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 KBTBD11-OT1A0A1B0GTJ5 212 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 TGOLN2O43493 480 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 MPDU1O75352 247 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms