RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	TGIF2LX	Q8IUE1	241 aa		9.81	□□□□□ -0.84
MATR3-231	ENST00000502394	CD300LF	Q8TDQ1	290 aa		9.81	□□□□□ -0.84
MATR3-231	ENST00000502394	RBPMS	Q93062	196 aa	Known RBP	9.81	□□□□□ -0.84
MATR3-231	ENST00000502394	ST6GAL2	Q96JF0	529 aa		9.81	□□□□□ -0.84
MATR3-231	ENST00000502394	OR2A7	Q96R45	310 aa		9.81	□□□□□ -0.84
MATR3-231	ENST00000502394	C7orf69	Q9H7B7	122 aa		9.81	□□□□□ -0.84
MATR3-231	ENST00000502394	PRELID3B	Q9Y3B1	194 aa		9.81	□□□□□ -0.84
MATR3-231	ENST00000502394	NOTCH2	Q04721	2471 aa		9.81	□□□□□ -0.84
MATR3-231	ENST00000502394	ABCA1	O95477	2261 aa		9.81	□□□□□ -0.84
MATR3-231	ENST00000502394	ELOA3C	A0A087WX78	387 aa	Predicted RBP	9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	IGHV1-69D	A0A0B4J2H0	117 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	IGHV1-3	A0A0C4DH29	117 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	OOSP1	A8MZH6	123 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	CCS	O14618	274 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	NPFF	O15130	113 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	S1PR2	O95136	353 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	TGFA	P01135	160 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	IGHV1-69	P01742	117 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	GAPDH	P04406	335 aa	Known RBP	9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	LPAR6	P43657	344 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	REG1B	P48304	166 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	H2BFS	P57053	126 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	OR2B11	Q5JQS5	317 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	TMEM268	Q5VZI3	342 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	GGNBP1	Q5YKI7	109 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	CYB5R2	Q6BCY4	276 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	PDZD9	Q8IXQ8	264 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	OR8H3	Q8N146	312 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	DYNAP	Q8N1N2	210 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	SLC35G3	Q8N808	338 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	CFHR4	Q92496	578 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	SEC22A	Q96IW7	307 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	PLEKHA2	Q9HB19	425 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	SLC35D1	Q9NTN3	355 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	COMMD9	Q9P000	198 aa		9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	ANK3	Q12955	4377 aa	Known RBP	9.8	□□□□□ -0.84
MATR3-231	ENST00000502394	TRAV40	A0A0B4J280	105 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394		A0A0G2JRQ6	117 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394		A0A1W2PRD5	423 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394		A0A1W2PRF3	423 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394		A0A1W2PRM7	423 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	MPTX1	A8MV57	137 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	GOSR2	O14653	212 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	FCGR3B	O75015	233 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	SIX6	O95475	246 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	HPRT1	P00492	218 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	IGKV1-5	P01602	117 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	SERPINE2	P07093	398 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	HOXB5	P09067	269 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	IGHV4-38-2	P0DP08	117 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	RRAS	P10301	218 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	SAA4	P35542	130 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	CEACAM3	P40198	252 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	CD300C	Q08708	224 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	IL15RA	Q13261	267 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	POU2AF1	Q16633	256 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	TMEM177	Q53S58	311 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	DHRS7B	Q6IAN0	325 aa	Predicted RBP	9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	ZNF695	Q8IW36	515 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	UXS1	Q8NBZ7	420 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	OR4S2	Q8NH73	311 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	C17orf50	Q8WW18	174 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	LSM10	Q969L4	123 aa	Known RBP	9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	RPE	Q96AT9	228 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	WDR89	Q96FK6	387 aa	Predicted RBP	9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	TMED3	Q9Y3Q3	217 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	MYO9A	B2RTY4	2548 aa		9.79	□□□□□ -0.84
MATR3-231	ENST00000502394	MAP1A	P78559	2803 aa	Predicted RBP	9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	BAHCC1	Q9P281	2608 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	PIGBOS1	A0A0B4J2F0	54 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	FAM90A9P	A6NNJ1	464 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	APOA2	P02652	100 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	IGKV1-16	P04430	117 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	GIP	P09681	153 aa	Predicted RBP	9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	VDAC1	P21796	283 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	AKAP14	Q86UN6	197 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	PDPN	Q86YL7	162 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	ASB13	Q8WXK3	278 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	RBMXL1	Q96E39	390 aa	Known RBP	9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	MALSU1	Q96EH3	234 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	OR10C1	Q96KK4	312 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	ZNF436	Q9C0F3	470 aa	Predicted RBP	9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	RANGRF	Q9HD47	186 aa	Predicted RBP	9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	ZAN	Q9Y493	2812 aa		9.78	□□□□□ -0.84
MATR3-231	ENST00000502394	SVEP1	Q4LDE5	3571 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	SRRM4	A7MD48	611 aa	Known RBP	9.77	□□□□□ -0.85
MATR3-231	ENST00000502394		G3V3Q6	166 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	TIMM23	O14925	209 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	CCNK	O75909	580 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	CRYZL1	O95825	349 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	IL6R	P08887	468 aa	Predicted RBP	9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	SLC25A6	P12236	298 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	EPHA1	P21709	976 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	CD1B	P29016	333 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	MC5R	P33032	325 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	LGALS4	P56470	323 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	CD83	Q01151	205 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	EBI3	Q14213	229 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	RTL8B	Q17RB0	113 aa		9.77	□□□□□ -0.85
MATR3-231	ENST00000502394	GPR157	Q5UAW9	335 aa		9.77	□□□□□ -0.85

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms