RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 IGHG4P01861 327 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 RRASP10301 218 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 SRSF7Q16629 238 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDK11A-222ENST00000498810 VMA21Q3ZAQ7 101 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 FOXB2Q5VYV0 432 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 ZNF660Q6AZW8 331 aaPredicted RBP8.35□□□□□ -1.07
CDK11A-222ENST00000498810 UNQ5815/PRO19632Q6UWF5 114 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 PPP1R27Q86WC6 154 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 TCTEX1D1Q8N7M0 179 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 LINC00482Q8N8I6 264 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 ZNF383Q8NA42 475 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 C4orf3Q8WVX3 66 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 ARPC1AQ92747 370 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 RITA1Q96K30 269 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 OR5B12Q96R08 314 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 DCSTAMPQ9H295 470 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDK11A-222ENST00000498810 SDHAF2Q9NX18 166 aa8.35□□□□□ -1.07
CDK11A-222ENST00000498810 ELF5Q9UKW6 265 aaPredicted RBP8.35□□□□□ -1.07
CDK11A-222ENST00000498810 FOXA2Q9Y261 457 aaPredicted RBP8.35□□□□□ -1.07
CDK11A-222ENST00000498810 MRPS7Q9Y2R9 242 aaKnown RBP8.35□□□□□ -1.07
CDK11A-222ENST00000498810 A0A0A6YYH2 397 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 A6NJ64 397 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 MPPED1O15442 326 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 TUSC2O75896 110 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 IGKV1-16P04430 117 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 NFYAP23511 347 aaPredicted RBP8.34□□□□□ -1.07
CDK11A-222ENST00000498810 CDX1P47902 265 aaPredicted RBP8.34□□□□□ -1.07
CDK11A-222ENST00000498810 CX3CL1P78423 397 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 PSG5Q15238 335 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 ACTBL2Q562R1 376 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 UBE2NLQ5JXB2 153 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 KPRPQ5T749 579 aaPredicted RBP8.34□□□□□ -1.07
CDK11A-222ENST00000498810 PYHIN1Q6K0P9 492 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 CNIH2Q6PI25 160 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 ETV3LQ6ZN32 361 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 Q6ZS49 121 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 KCTD9Q7L273 389 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 H1FOOQ8IZA3 346 aaPredicted RBP8.34□□□□□ -1.07
CDK11A-222ENST00000498810 ZNF645Q8N7E2 425 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 BVESQ8NE79 360 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 BEST4Q8NFU0 473 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 OR5H6Q8NGV6 325 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 FAM103A1Q9BTL3 118 aaKnown RBP8.34□□□□□ -1.07
CDK11A-222ENST00000498810 AURKAIP1Q9NWT8 199 aaPredicted RBP8.34□□□□□ -1.07
CDK11A-222ENST00000498810 ZNF580Q9UK33 172 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 VSIG4Q9Y279 399 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 PRELID3BQ9Y3B1 194 aa8.34□□□□□ -1.07
CDK11A-222ENST00000498810 NOTCH3Q9UM47 2321 aa8.34□□□□□ -1.08
CDK11A-222ENST00000498810 CREBL2O60519 120 aaPredicted RBP8.33□□□□□ -1.08
CDK11A-222ENST00000498810 TMEM127O75204 238 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 SLC22A5O76082 557 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 ACTL6BO94805 426 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 CRYZL1O95825 349 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 FCER2P06734 321 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 OR8U8P0C7N1 319 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 PSMB8P28062 276 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 HOXD3P31249 432 aaPredicted RBP8.33□□□□□ -1.08
CDK11A-222ENST00000498810 TGFBR1P36897 503 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 CBX5P45973 191 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 LGALS7P47929 136 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 TPPP2P59282 170 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 NDPQ00604 133 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 CFHR3Q02985 330 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 FXYD3Q14802 87 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 ZNF260Q3ZCT1 412 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 OR2B11Q5JQS5 317 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 TMEM69Q5SWH9 247 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 SAMD12Q8N8I0 201 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 OR11H1Q8NG94 326 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 TCTEX1D2Q8WW35 142 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 ACOT12Q8WYK0 555 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 SLC25A38Q96DW6 304 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 S100A16Q96FQ6 103 aaKnown RBP8.33□□□□□ -1.08
CDK11A-222ENST00000498810 RAX2Q96IS3 184 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 ZMAT5Q9UDW3 170 aaKnown RBP8.33□□□□□ -1.08
CDK11A-222ENST00000498810 ANXA10Q9UJ72 324 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 SPATA2Q9UM82 520 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 OR2W1Q9Y3N9 320 aa8.33□□□□□ -1.08
CDK11A-222ENST00000498810 IGKV1D-8A0A087WSZ0 117 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 MEIS3P1A6NDR6 274 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 FCGR3BO75015 233 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 LINC00205P59089 165 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 FXYD4P59646 89 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 HERV-K104P61576 105 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 ZNF616Q08AN1 781 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 TNXAQ16473 311 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 LFNGQ8NES3 379 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 WFDC9Q8NEX5 89 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 CASTOR1Q8WTX7 329 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 SECTM1Q8WVN6 248 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 UBE2E2Q96LR5 201 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 MS4A10Q96PG2 267 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 TOLLIPQ9H0E2 274 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 GAB2Q9UQC2 676 aa8.32□□□□□ -1.08
CDK11A-222ENST00000498810 C13orf42A0A1B0GVH6 325 aa8.31□□□□□ -1.08
CDK11A-222ENST00000498810 SMIM31A0A1B0GVY4 71 aa8.31□□□□□ -1.08
CDK11A-222ENST00000498810 SEC14L6B5MCN3 397 aa8.31□□□□□ -1.08
CDK11A-222ENST00000498810 FCN1O00602 326 aa8.31□□□□□ -1.08
CDK11A-222ENST00000498810 TRGV3P03979 118 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms