RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 FAM172BPA6NC97 362 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 A8MV72 311 aaPredicted RBP4.34□□□□□ -1.71
GGPS1-208ENST00000497327 BOLA2-SMG1P6H3BVE0 249 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 J3QKU1 62 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 GPR31O00270 319 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 SPINT2O43291 252 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 NDUFB3O43676 98 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 SSNA1O43805 119 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 YPEL1O60688 119 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 PGLYRP1O75594 196 aaPredicted RBP4.34□□□□□ -1.71
GGPS1-208ENST00000497327 MMP23AO75900 390 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 IGHV4-39P01824 125 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 HLA-AP01891 365 aaKnown RBP4.34□□□□□ -1.71
GGPS1-208ENST00000497327 PAX1P15863 534 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 CD34P28906 385 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 PPP1CCP36873 323 aaKnown RBP4.34□□□□□ -1.71
GGPS1-208ENST00000497327 PDLIM4P50479 330 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 LUMP51884 338 aaPredicted RBP4.34□□□□□ -1.71
GGPS1-208ENST00000497327 EDDM3BP56851 147 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 H2BFSP57053 126 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 PIGPP57054 158 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 FXYD4P59646 89 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 RPL31P62899 125 aaKnown RBP4.34□□□□□ -1.71
GGPS1-208ENST00000497327 IL15RAQ13261 267 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 ZNF273Q14593 569 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 TMEM187Q14656 261 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 TMEM30BQ3MIR4 351 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 MORN2Q502X0 79 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 LRRC10Q5BKY1 277 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 AVPI1Q5T686 147 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 GFI1BQ5VTD9 330 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 DCAF12L2Q5VW00 463 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 KCTD9Q7L273 389 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 ZNF329Q86UD4 541 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 FAM185AQ8N0U4 392 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 LRTM2Q8N967 370 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 ZNF565Q8N9K5 539 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 ZNF439Q8NDP4 499 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 LY6G5BQ8NDX9 201 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 OR10A7Q8NGE5 316 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 OR52M1Q8NGK5 317 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 RFESDQ8TAC1 157 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 C8orf46Q8TAG6 207 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 GLYATL2Q8WU03 294 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 FAM216AQ8WUB2 273 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 RTN4IP1Q8WWV3 396 aaPredicted RBP4.34□□□□□ -1.71
GGPS1-208ENST00000497327 IL1F10Q8WWZ1 152 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 RAB1CQ92928 201 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 TOMM40LQ969M1 308 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 AKR1E2Q96JD6 320 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 YPEL2Q96QA6 119 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 SLC5A7Q9GZV3 580 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 PATZ1Q9HBE1 687 aaKnown RBP4.34□□□□□ -1.71
GGPS1-208ENST00000497327 RANGRFQ9HD47 186 aaPredicted RBP4.34□□□□□ -1.71
GGPS1-208ENST00000497327 OR2S2Q9NQN1 319 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 IDI2-AS1Q9NZ38 188 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 JPT1Q9UK76 154 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 GAB2Q9UQC2 676 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 LINC00312Q9Y6C7 94 aa4.34□□□□□ -1.71
GGPS1-208ENST00000497327 PTPN13Q12923 2485 aa4.34□□□□□ -1.72
GGPS1-208ENST00000497327 HRNRQ86YZ3 2850 aaPredicted RBP4.34□□□□□ -1.72
GGPS1-208ENST00000497327 TANC2Q9HCD6 1990 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 A0A087X0M5 115 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 IGHV3-43A0A0B4J1X8 118 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 TEX13DA0A0J9YY54 714 aaPredicted RBP4.33□□□□□ -1.72
GGPS1-208ENST00000497327 A0A1B0GX30 115 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 C17orf98A8MV24 154 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 SLC31A2O15432 143 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 HSPA12AO43301 675 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 PPIHO43447 177 aaKnown RBP4.33□□□□□ -1.72
GGPS1-208ENST00000497327 SLC22A5O76082 557 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 SIX6O95475 246 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 C1QBP02746 253 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 GIPP09681 153 aaPredicted RBP4.33□□□□□ -1.72
GGPS1-208ENST00000497327 OR8U9P0C7N5 309 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 IGHV3-43DP0DP04 118 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 ANXA3P12429 323 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 COX6B1P14854 86 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 CCL3L1P16619 93 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 F2RP25116 425 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 BRWD1-AS2P59051 145 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 SLC9A3R2Q15599 337 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 SP6Q3SY56 376 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 Q3ZCU0 254 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 PHLDA2Q53GA4 152 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 Q5BKY6 102 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 CT45A1Q5HYN5 189 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 WDR25Q64LD2 544 aaPredicted RBP4.33□□□□□ -1.72
GGPS1-208ENST00000497327 PRSS57Q6UWY2 283 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 HEPN1Q6WQI6 88 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 TBC1D26Q86UD7 250 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 SGPP2Q8IWX5 399 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 DRAM1Q8N682 238 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 ZNF645Q8N7E2 425 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 CCDC71LQ8N9Z2 235 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 OR5M8Q8NGP6 311 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 OR8U1Q8NH10 309 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 CT45A3Q8NHU0 189 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 LHFPL5Q8TAF8 219 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 ZNF596Q8TC21 504 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms