RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 PAQR9Q6ZVX9 377 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 LILRA2Q8N149 483 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 OR51G1Q8NGK1 321 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 TSACCQ96A04 125 aaPredicted RBP5.06□□□□□ -1.6
USF3-204ENST00000496826 C2CD4BA6NLJ0 364 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 CXCL5P42830 114 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 LSM6P62312 80 aaKnown RBP5.06□□□□□ -1.6
USF3-204ENST00000496826 PRSS36Q5K4E3 855 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 LDLRAD3Q86YD5 345 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 ORMDL3Q8N138 153 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 OR11G2Q8NGC1 345 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 OSR1Q8TAX0 266 aaPredicted RBP5.06□□□□□ -1.6
USF3-204ENST00000496826 LPPQ93052 612 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 TRAV12-3A0A0B4J271 114 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 CEACAM18A8MTB9 384 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 PLPP3O14495 311 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 KLK8O60259 260 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 IGHV4-39P01824 125 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 ISG15P05161 165 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 CYBAP13498 195 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 TCTN3Q6NUS6 607 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 ADGRA1Q86SQ6 560 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 MDS2Q8NDY4 140 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 GTF3C1Q12789 2109 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 SCN2AQ99250 2005 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 BRWD1Q9NSI6 2320 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 SRSF2Q01130 221 aaKnown RBP5.06□□□□□ -1.6
USF3-204ENST00000496826 ERCC8Q13216 396 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 DEFB109BQ30KR1 87 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 CLEC14AQ86T13 490 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 ARIH2OSQ8N7S6 290 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 ZNF114Q8NC26 417 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 AQP3Q92482 292 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 SCAMP4Q969E2 229 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 CKAP5Q14008 2032 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 CEP152O94986 1710 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 LOC390937A0A1W2PQ73 354 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 TNFSF13O75888 250 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 RCC1P18754 421 aaPredicted RBP5.06□□□□□ -1.6
USF3-204ENST00000496826 P2RY2P41231 377 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 Q96M85 177 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 ATOH8Q96SQ7 321 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 FAM53CQ9NYF3 392 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 TRAV8-1A0A0A6YYK1 113 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 F6UB75 175 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 J3QR06 171 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 CD200R1LQ6Q8B3 271 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 SVILO95425 2214 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 H0Y980 276 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 PDCD6O75340 191 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 THY1P04216 161 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 ZNF345Q14585 488 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 BHLHE23Q8NDY6 225 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 SCN1AP35498 2009 aa5.06□□□□□ -1.6
USF3-204ENST00000496826 TRAV13-2A0A0B4J235 113 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 A0A0G2JMM0 328 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 A0A0G2JNJ9 132 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 A0A1W2PPB8 328 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 KIR3DP1A8MWS1 328 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 PRYO14603 147 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 CELA3AP09093 270 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 SLC25A16P16260 332 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 DRD3P35462 400 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 TSPAN7P41732 249 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 FBXL22Q6P050 247 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 INO80CQ6PI98 192 aaPredicted RBP5.05□□□□□ -1.6
USF3-204ENST00000496826 Q6ZWC4 215 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 CYS1Q717R9 158 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 PPP1R27Q86WC6 154 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 PCGF1Q9BSM1 259 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 WDR54Q9H977 334 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 Q9UFV3 132 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 C10orf71Q711Q0 1435 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 A0A1W2PPE3 182 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 UBE2CO00762 179 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 VCYO14598 125 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 AGAP20933 346 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 DMRTA1Q5VZB9 504 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 NCKAP5O14513 1909 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 NUP205Q92621 2012 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 A8MXK9 166 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 NXPH3O95157 252 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 SAA1P0DJI8 122 aaPredicted RBP5.05□□□□□ -1.6
USF3-204ENST00000496826 TXNRD3NBQ6F5E7 133 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 HCFC2Q9Y5Z7 792 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 NCOR1O75376 2440 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 A0A0G2JLL6 359 aaPredicted RBP5.05□□□□□ -1.6
USF3-204ENST00000496826 NDUFB6O95139 128 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 SSPNQ14714 243 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 IL17AQ16552 155 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 TMEM177Q53S58 311 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 PRRT2Q7Z6L0 340 aaPredicted RBP5.05□□□□□ -1.6
USF3-204ENST00000496826 ZNF740Q8NDX6 193 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 ZNRF2Q8NHG8 242 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 DNAJC19Q96DA6 116 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 FOXJ2Q9P0K8 574 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 SDK1Q7Z5N4 2213 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 DHHO43323 396 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 C14orf177Q52M58 125 aa5.05□□□□□ -1.6
USF3-204ENST00000496826 STPG4Q8N801 248 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms