RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 GMPPAQ96IJ6 420 aaPredicted RBP10.86□□□□□ -0.67
PTPN7-217ENST00000495688 SRD5A3Q9H8P0 318 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 GFOD1Q9NXC2 390 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 PTPRBP23467 1997 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 TRAV38-1A0A0B4J264 116 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 MARCH11A6NNE9 402 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 CLDN14O95500 239 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 DEFA6Q01524 100 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 TGFBR3Q03167 851 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 PMS2P11Q13670 270 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 EDDM3AQ14507 147 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 SLC35E4Q6ICL7 350 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 ACP7Q6ZNF0 438 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 QTRT1Q9BXR0 403 aaKnown RBP10.86□□□□□ -0.67
PTPN7-217ENST00000495688 FAM234AQ9H0X4 552 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 PITPNC1Q9UKF7 332 aa10.86□□□□□ -0.67
PTPN7-217ENST00000495688 TMEM250H0YL14 139 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 PROP1O75360 226 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 COX5AP20674 150 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 UBE2G2P60604 165 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 FIP1L1Q6UN15 594 aaKnown RBP10.85□□□□□ -0.67
PTPN7-217ENST00000495688 VKORC1L1Q8N0U8 176 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 Q8N7P7 452 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 ZBTB34Q8NCN2 500 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 FER1L6-AS2Q96M78 137 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 TRIB1Q96RU8 372 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 ACTR3CQ9C0K3 210 aaPredicted RBP10.85□□□□□ -0.67
PTPN7-217ENST00000495688 ZDHHC11Q9H8X9 412 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 TMEM210A6NLX4 147 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 J3QW42 95 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 CDX4O14627 284 aaPredicted RBP10.85□□□□□ -0.67
PTPN7-217ENST00000495688 OR9G9P0C7N8 305 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 ZNF883P0CG24 379 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 VWA1Q6PCB0 445 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 ZNF709Q8N972 641 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 C14orf144Q96I85 54 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 PYGO2Q9BRQ0 406 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 DERL1Q9BUN8 251 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 KALRNO60229 2985 aa10.85□□□□□ -0.67
PTPN7-217ENST00000495688 SMCO3A2RU48 225 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 C15orf62A8K5M9 175 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 PPP5D1E7EU14 171 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 GATCO43716 136 aaKnown RBP10.84□□□□□ -0.67
PTPN7-217ENST00000495688 GYPAP02724 150 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 AMBPP02760 352 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 FOXF2Q12947 444 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 ATP6V1FQ16864 119 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 ZNF66Q6ZN08 573 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 TMEM37Q8WXS4 190 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 TET2Q6N021 2002 aaPredicted RBP10.84□□□□□ -0.67
PTPN7-217ENST00000495688 ADGRG4Q8IZF6 3080 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 CNOT1A5YKK6 2376 aaKnown RBP10.84□□□□□ -0.67
PTPN7-217ENST00000495688 CEP250Q9BV73 2442 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 C11orf94C9JXX5 98 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 TIMM8AO60220 97 aaPredicted RBP10.84□□□□□ -0.67
PTPN7-217ENST00000495688 CHRNA7P36544 502 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 ATP5G3P48201 142 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 SOX8P57073 446 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 SRSF6Q13247 344 aaKnown RBP10.84□□□□□ -0.67
PTPN7-217ENST00000495688 HES3Q5TGS1 186 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 TMEM183AQ8IXX5 376 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 OR5B12Q96R08 314 aa10.84□□□□□ -0.67
PTPN7-217ENST00000495688 XKRY2A2RUG3 117 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 RAB29O14966 203 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 TGOLN2O43493 480 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 EDDM3BP56851 147 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 FAM3BP58499 235 aaPredicted RBP10.83□□□□□ -0.68
PTPN7-217ENST00000495688 FAM214BQ7L5A3 538 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 CD177Q8N6Q3 437 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 TMEM204Q9BSN7 226 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 MRPL37Q9BZE1 423 aaKnown RBP10.83□□□□□ -0.68
PTPN7-217ENST00000495688 PATZ1Q9HBE1 687 aaKnown RBP10.83□□□□□ -0.68
PTPN7-217ENST00000495688 FUT9Q9Y231 359 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 CACNA1HO95180 2353 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 CACNA1GO43497 2377 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 FCGR3BO75015 233 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 MBP02144 154 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 CDC34P49427 236 aaPredicted RBP10.83□□□□□ -0.68
PTPN7-217ENST00000495688 Q6ZT83 130 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 OR1P1Q8NH06 330 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 R3HDM4Q96D70 268 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 MANBALQ9NQG1 85 aa10.83□□□□□ -0.68
PTPN7-217ENST00000495688 HRASP01112 189 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 VWC2Q2TAL6 325 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 UTF1Q5T230 341 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 ALKBH2Q6NS38 261 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 INO80CQ6PI98 192 aaPredicted RBP10.82□□□□□ -0.68
PTPN7-217ENST00000495688 WDR31Q8NA23 367 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 Q8TCH9 128 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 NEIL1Q96FI4 390 aaPredicted RBP10.82□□□□□ -0.68
PTPN7-217ENST00000495688 CLCF1Q9UBD9 225 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 IGKV3-15P01624 115 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 CECR9P0C854 216 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 GZMBP10144 247 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 CD1BP29016 333 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 TNFSF10P50591 281 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 GNB2P62879 340 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 CST9LP1Q5W188 147 aa10.82□□□□□ -0.68
PTPN7-217ENST00000495688 MEGF10Q96KG7 1140 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms