RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SAP30O75446 220 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 TRGV3P03979 118 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 HSPB1P04792 205 aaKnown RBP7.41□□□□□ -1.22
MSH5-218ENST00000494646 APELAP0DMC3 54 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 HIST1H1DP16402 221 aaKnown RBP7.41□□□□□ -1.22
MSH5-218ENST00000494646 CD40LGP29965 261 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 CRIP2P52943 208 aaPredicted RBP7.41□□□□□ -1.22
MSH5-218ENST00000494646 GABARAPL2P60520 117 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 UBE2UQ5VVX9 321 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 ARPC1AQ92747 370 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 GINS4Q9BRT9 223 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 OR51E2Q9H255 320 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 RNF167Q9H6Y7 350 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 DAPK2Q9UIK4 370 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 ZNF256Q9Y2P7 627 aaPredicted RBP7.41□□□□□ -1.22
MSH5-218ENST00000494646 TENM3Q9P273 2699 aa7.41□□□□□ -1.22
MSH5-218ENST00000494646 ANKRD34BA5PLL1 514 aa7.4□□□□□ -1.22
MSH5-218ENST00000494646 IGLV2-23P01705 113 aa7.4□□□□□ -1.22
MSH5-218ENST00000494646 CRYGBP07316 175 aa7.4□□□□□ -1.22
MSH5-218ENST00000494646 LGALS1P09382 135 aaKnown RBP7.4□□□□□ -1.22
MSH5-218ENST00000494646 CLEC2LP0C7M8 214 aa7.4□□□□□ -1.22
MSH5-218ENST00000494646 LGALS7P47929 136 aa7.4□□□□□ -1.22
MSH5-218ENST00000494646 SSBP2P81877 361 aaPredicted RBP7.4□□□□□ -1.22
MSH5-218ENST00000494646 DEFA5Q01523 94 aa7.4□□□□□ -1.22
MSH5-218ENST00000494646 MXD1Q05195 221 aa7.4□□□□□ -1.22
MSH5-218ENST00000494646 ZNF429Q86V71 674 aa7.4□□□□□ -1.22
MSH5-218ENST00000494646 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.4□□□□□ -1.22
MSH5-218ENST00000494646 HARBI1Q96MB7 349 aa7.4□□□□□ -1.22
MSH5-218ENST00000494646 CABLES2Q9BTV7 478 aa7.4□□□□□ -1.22
MSH5-218ENST00000494646 SSR3Q9UNL2 185 aa7.4□□□□□ -1.22
MSH5-218ENST00000494646 RRP15Q9Y3B9 282 aaKnown RBP7.4□□□□□ -1.22
MSH5-218ENST00000494646 LINC00473A8K010 186 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 NOTOA8MTQ0 251 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 MRPS14O60783 128 aaKnown RBP7.39□□□□□ -1.23
MSH5-218ENST00000494646 SPDEFO95238 335 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 SPNP16150 400 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 GALP22466 123 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 NFYAP23511 347 aaPredicted RBP7.39□□□□□ -1.23
MSH5-218ENST00000494646 FGF9P31371 208 aaPredicted RBP7.39□□□□□ -1.23
MSH5-218ENST00000494646 DUTP33316 252 aaKnown RBP7.39□□□□□ -1.23
MSH5-218ENST00000494646 INSL3P51460 131 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 CBX3Q13185 183 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 DCTN2Q13561 401 aaKnown RBP7.39□□□□□ -1.23
MSH5-218ENST00000494646 TMEM177Q53S58 311 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 PYHIN1Q6K0P9 492 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 IDO2Q6ZQW0 420 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 OVCH2Q7RTZ1 564 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 HAPLN4Q86UW8 402 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 H1FOOQ8IZA3 346 aaPredicted RBP7.39□□□□□ -1.23
MSH5-218ENST00000494646 POC5Q8NA72 575 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 NUDCD2Q8WVJ2 157 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 PHB2Q99623 299 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 DCUN1D5Q9BTE7 237 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 SLA2Q9H6Q3 261 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 STUB1Q9UNE7 303 aa7.39□□□□□ -1.23
MSH5-218ENST00000494646 C13orf42A0A1B0GVH6 325 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 TMEM235A6NFC5 223 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 MSGN1A6NI15 193 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 TUSC2O75896 110 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 CRYZL1O95825 349 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 NHLRC4P0CG21 123 aaPredicted RBP7.38□□□□□ -1.23
MSH5-218ENST00000494646 RRASP10301 218 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 SDC2P34741 201 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 RPL30P62888 115 aaKnown RBP7.38□□□□□ -1.23
MSH5-218ENST00000494646 TNXAQ16473 311 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 SRSF7Q16629 238 aaKnown RBP eCLIP7.38□□□□□ -1.23
MSH5-218ENST00000494646 RTL8BQ17RB0 113 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 MRGPRG-AS1Q2M3A8 158 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 OR2B11Q5JQS5 317 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 HACD4Q5VWC8 232 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 ACSM6Q6P461 480 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 MZT2AQ6P582 158 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 OR5H6Q8NGV6 325 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 WWC2-AS2Q96NR7 200 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 OR4C12Q96R67 309 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 YTHDF1Q9BYJ9 559 aaKnown RBP7.38□□□□□ -1.23
MSH5-218ENST00000494646 Q9H521 79 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.38□□□□□ -1.23
MSH5-218ENST00000494646 COA4Q9NYJ1 87 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 SMAD5-AS1Q9Y6J3 95 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 PLECQ15149 4684 aaKnown RBP7.38□□□□□ -1.23
MSH5-218ENST00000494646 LYSTQ99698 3801 aa7.38□□□□□ -1.23
MSH5-218ENST00000494646 LOC100506127A0A0U1RQW1 187 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 SSX5O60225 188 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 FCGR3BO75015 233 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 HLA-DQB1P01920 261 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 FCER2P06734 321 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 PTHLHP12272 177 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 GP9P14770 177 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 DTYMKP23919 212 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 GNG2P59768 71 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 PITPNAQ00169 270 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 ARL6IP1Q15041 203 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 NEDD8Q15843 81 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 IDNKQ5T6J7 187 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 SFXN4Q6P4A7 337 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 CNIH2Q6PI25 160 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 Q6ZS49 121 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 TPRA1Q86W33 373 aa7.37□□□□□ -1.23
MSH5-218ENST00000494646 SBSPONQ8IVN8 264 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms