RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 A0A075B6Q4 140 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 SRRM4A7MD48 611 aaKnown RBP9.61□□□□□ -0.87
SKA1-205ENST00000494518 A8MZ25 164 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 H0Y980 276 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 FABP7O15540 132 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 PRH1P02810 166 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 GSTT2P0CG29 244 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 GSTT2BP0CG30 244 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 CD37P11049 281 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 LGALS7P47929 136 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 RPEL1Q2QD12 228 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 MOGAT2Q3SYC2 334 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 HES5Q5TA89 166 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 OGFRL1Q5TC84 451 aaPredicted RBP9.61□□□□□ -0.87
SKA1-205ENST00000494518 GTSCR1Q86UQ5 136 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 FAM3DQ96BQ1 224 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 ZNF230Q9UIE0 474 aaPredicted RBP9.61□□□□□ -0.87
SKA1-205ENST00000494518 SELENOKQ9Y6D0 94 aa9.61□□□□□ -0.87
SKA1-205ENST00000494518 TMEM272A0A1B0GTI8 110 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 MSGN1A6NI15 193 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 J3QRK9 145 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 MPPED1O15442 326 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 DENRO43583 198 aaKnown RBP9.6□□□□□ -0.87
SKA1-205ENST00000494518 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
SKA1-205ENST00000494518 MRPS15P82914 257 aaKnown RBP9.6□□□□□ -0.87
SKA1-205ENST00000494518 TAGLNQ01995 201 aaKnown RBP9.6□□□□□ -0.87
SKA1-205ENST00000494518 CBX3Q13185 183 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 TNXAQ16473 311 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 MRGPRG-AS1Q2M3A8 158 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 C2orf76Q3KRA6 126 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 ZNF343Q6P1L6 599 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.6□□□□□ -0.87
SKA1-205ENST00000494518 OR56B1Q8NGI3 324 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 OR4A4PQ8NGN8 299 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 THAP7Q9BT49 309 aaPredicted RBP9.6□□□□□ -0.87
SKA1-205ENST00000494518 WFDC10AQ9H1F0 79 aa9.6□□□□□ -0.87
SKA1-205ENST00000494518 RBM7Q9Y580 266 aaKnown RBP9.6□□□□□ -0.87
SKA1-205ENST00000494518 CRYZL1O95825 349 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 IFNA6P05013 189 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 FCGR3AP08637 254 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 EDN2P20800 178 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 AADACP22760 399 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 CD81P60033 236 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 EXOSC2Q13868 293 aaKnown RBP9.59□□□□□ -0.87
SKA1-205ENST00000494518 IRF3Q14653 427 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 RTL8BQ17RB0 113 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 TMEM177Q53S58 311 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 C10orf55Q5SWW7 151 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 RNLSQ5VYX0 342 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 LCN12Q6JVE5 192 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 Q8N402 240 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 OR10J5Q8NHC4 309 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 ACOT12Q8WYK0 555 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 AKIP1Q9NQ31 210 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 SCN3BQ9NY72 215 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 KCNK7Q9Y2U2 307 aa9.59□□□□□ -0.87
SKA1-205ENST00000494518 A0A0B4J203 849 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 BMPR1BO00238 502 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 GNB3P16520 340 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 MAP2K4P45985 399 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 SERPINB10P48595 397 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 RHOGP84095 191 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 FABP5Q01469 135 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 TATDN3Q17R31 274 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 VMA21Q3ZAQ7 101 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 C19orf35Q6ZS72 473 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 ADAD2Q8NCV1 583 aaKnown RBP9.58□□□□□ -0.88
SKA1-205ENST00000494518 SRSF12Q8WXF0 261 aaKnown RBP9.58□□□□□ -0.88
SKA1-205ENST00000494518 RAB3CQ96E17 227 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 GINS4Q9BRT9 223 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 CABLES2Q9BTV7 478 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 CCDC90BQ9GZT6 254 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 CEPT1Q9Y6K0 416 aa9.58□□□□□ -0.88
SKA1-205ENST00000494518 TRBV6-7A0A0A0MS04 114 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 SHISA3A0PJX4 238 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 LINC00473A8K010 186 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 PPP5D1E7EU14 171 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 CASQ2O14958 399 aaPredicted RBP9.57□□□□□ -0.88
SKA1-205ENST00000494518 ARL6IP5O75915 188 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 CD7P09564 240 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 OR9G9P0C7N8 305 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 OR10A3P58181 314 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 ZNF45Q02386 682 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 TPBGQ13641 420 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 PRSS8Q16651 343 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 CD300EQ496F6 205 aaPredicted RBP9.57□□□□□ -0.88
SKA1-205ENST00000494518 OR2B11Q5JQS5 317 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 DEFB125Q8N687 156 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 DYNLRB2Q8TF09 96 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 SNAPC3Q92966 411 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 USMG5Q96IX5 58 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 TMEM68Q96MH6 324 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 NEURL2Q9BR09 285 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 V9GY05 133 aa9.57□□□□□ -0.88
SKA1-205ENST00000494518 IGKV1D-8A0A087WSZ0 117 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 ANKRD65E5RJM6 399 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 OR2A4O95047 310 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 HLA-AP01891 365 aaKnown RBP9.56□□□□□ -0.88
SKA1-205ENST00000494518 SAA1P0DJI8 122 aaPredicted RBP9.56□□□□□ -0.88
SKA1-205ENST00000494518 DUTP33316 252 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms