RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 VIRMAQ69YN4 1812 aaKnown RBP4.87□□□□□ -1.63
SNX13-210ENST00000494402 MIA3Q5JRA6 1907 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 CD109Q6YHK3 1445 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 MYH2Q9UKX2 1941 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 IGHV3-72A0A0B4J1Y9 119 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 FAM25AB3EWG3 89 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 FAM25CB3EWG5 89 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 FAM25GB3EWG6 89 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 BANF1O75531 89 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 SEC11BP0C7V7 166 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 ZNF806P0C7X5 589 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 SMIM17P0DL12 118 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 SMIM10L2AP0DMW4 78 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 SMIM10L2BP0DMW5 78 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 POLR2HP52434 150 aaKnown RBP4.86□□□□□ -1.63
SNX13-210ENST00000494402 DEFA3P59666 94 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 HOXC5Q00444 222 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 Q6Q795 121 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 UNQ9165/PRO28630Q6UXU0 137 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 C4orf22Q6V702 233 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 Q6ZS49 121 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 C1orf174Q8IYL3 243 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 ORMDL3Q8N138 153 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 KRTCAP2Q8N6L1 136 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 KLHL30-AS1Q8NEE0 82 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 SLC7A6Q92536 515 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 ADAT3Q96EY9 351 aaPredicted RBP4.86□□□□□ -1.63
SNX13-210ENST00000494402 PDXPQ96GD0 296 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 IGF2BP2-AS1Q96M15 143 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 DERL3Q96Q80 235 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 TRIB3Q96RU7 358 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 GGACTQ9BVM4 153 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 FBXL12Q9NXK8 326 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 CALML5Q9NZT1 146 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 ZNF492Q9P255 531 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 TBX21Q9UL17 535 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 IGSF9BQ9UPX0 1349 aa4.86□□□□□ -1.63
SNX13-210ENST00000494402 RIMS1Q86UR5 1692 aaKnown RBP4.86□□□□□ -1.63
SNX13-210ENST00000494402 A0A096LPI6 279 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 TMEM269A0A1B0GVZ9 245 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 OR5H14A6NHG9 310 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 ZNF354AO60765 605 aaPredicted RBP4.85□□□□□ -1.63
SNX13-210ENST00000494402 IFNA10P01566 189 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 IFNGP01579 166 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 ADRA2AP08913 450 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 RPS3P23396 243 aaKnown RBP eCLIP4.85□□□□□ -1.63
SNX13-210ENST00000494402 CD200P41217 278 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 NUDT2P50583 147 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 ZNF136P52737 540 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 DHRS2Q13268 280 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 KIAA0040Q15053 153 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 MMDQ15546 238 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 LAIR2Q6ISS4 152 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 OR4K5Q8NGD3 323 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 ACOT12Q8WYK0 555 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 ZNF778Q96MU6 729 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 HMG20AQ9NP66 347 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 CYSLTR1Q9Y271 337 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 MOB4Q9Y3A3 225 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 RBM7Q9Y580 266 aaKnown RBP4.85□□□□□ -1.63
SNX13-210ENST00000494402 THSD7AQ9UPZ6 1657 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 DOCK3Q8IZD9 2030 aa4.85□□□□□ -1.63
SNX13-210ENST00000494402 ARAP3Q8WWN8 1544 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 SMG6Q86US8 1419 aaKnown RBP4.84□□□□□ -1.63
SNX13-210ENST00000494402 LST1O00453 97 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 COX7A2LO14548 114 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 CXorf1O96002 111 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 S100A2P29034 98 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 RPL36AP83881 106 aaKnown RBP4.84□□□□□ -1.63
SNX13-210ENST00000494402 PSG9Q00887 426 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 Q1RN00 199 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 C14orf178Q8N769 122 aaPredicted RBP4.84□□□□□ -1.63
SNX13-210ENST00000494402 C2orf15Q8WU43 125 aaKnown RBP4.84□□□□□ -1.63
SNX13-210ENST00000494402 IMUPQ9GZP8 106 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 SDF2L1Q9HCN8 221 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 TMEM38BQ9NVV0 291 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 LAMTOR2Q9Y2Q5 125 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 U3KQ87 197 aa4.84□□□□□ -1.63
SNX13-210ENST00000494402 MRC2Q9UBG0 1479 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 MED23Q9ULK4 1368 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 DUXBA0A1W2PPF3 345 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 IFITM10A6NMD0 228 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 A8MUN3 132 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 CLDN25C9JDP6 229 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 J3QRK9 145 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 SOCS1O15524 211 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 IGHV3-13P01766 116 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 ZNF688P0C7X2 276 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 NUDT1P36639 197 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 RAB13P51153 203 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 DAPP51397 102 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 LYZP61626 148 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 RRAS2P62070 204 aaPredicted RBP4.83□□□□□ -1.64
SNX13-210ENST00000494402 MORN2Q502X0 79 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 C3orf62Q6ZUJ4 267 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 ZNF440Q8IYI8 595 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 MRPL30Q8TCC3 161 aaKnown RBP4.83□□□□□ -1.64
SNX13-210ENST00000494402 ZNF721Q8TF20 911 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 ERMAPQ96PL5 475 aaPredicted RBP4.83□□□□□ -1.64
SNX13-210ENST00000494402 DEFB126Q9BYW3 111 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms