RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 KCTD12Q96CX2 325 aaKnown RBP17.11■□□□□ 0.33
HPS3-207ENST00000494327 DGCR14Q96DF8 476 aaKnown RBP17.11■□□□□ 0.33
HPS3-207ENST00000494327 RAX2Q96IS3 184 aa17.11■□□□□ 0.33
HPS3-207ENST00000494327 RBM38Q9H0Z9 239 aaKnown RBP17.11■□□□□ 0.33
HPS3-207ENST00000494327 IFT46Q9NQC8 304 aa17.11■□□□□ 0.33
HPS3-207ENST00000494327 CCL24O00175 119 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 IGLV2-23P01705 113 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 EGR2P11161 476 aaPredicted RBP17.1■□□□□ 0.33
HPS3-207ENST00000494327 FCGR2CP31995 323 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 CBX5P45973 191 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 TAS2R20P59543 309 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 GNB1P62873 340 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 TMEM267Q0VDI3 215 aaPredicted RBP17.1■□□□□ 0.33
HPS3-207ENST00000494327 TMEM177Q53S58 311 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 UNQ5815/PRO19632Q6UWF5 114 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 MINDY2Q8NBR6 621 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 DDB2Q92466 427 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 RCC1LQ96I51 464 aaKnown RBP17.1■□□□□ 0.33
HPS3-207ENST00000494327 NECAP2Q9NVZ3 263 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 RSL24D1Q9UHA3 163 aaKnown RBP17.1■□□□□ 0.33
HPS3-207ENST00000494327 NUBP2Q9Y5Y2 271 aa17.1■□□□□ 0.33
HPS3-207ENST00000494327 SRRM4A7MD48 611 aaKnown RBP17.09■□□□□ 0.33
HPS3-207ENST00000494327 ZNF701M0R085 212 aaPredicted RBP17.09■□□□□ 0.33
HPS3-207ENST00000494327 SLC22A5O76082 557 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 CNIH1O95406 144 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 CRYZL1O95825 349 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 IGLV1-40P01703 118 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 EIF4EP06730 217 aaKnown RBP17.09■□□□□ 0.33
HPS3-207ENST00000494327 PJVKQ0ZLH3 352 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 FXYD3Q14802 87 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 LFNGQ8NES3 379 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 GRPEL2Q8TAA5 225 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 CASTOR1Q8WTX7 329 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 OR5B12Q96R08 314 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 P2RX4Q99571 388 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 DCUN1D5Q9BTE7 237 aa17.09■□□□□ 0.33
HPS3-207ENST00000494327 FOXA2Q9Y261 457 aaPredicted RBP17.09■□□□□ 0.33
HPS3-207ENST00000494327 RBMX2Q9Y388 322 aaKnown RBP17.09■□□□□ 0.33
HPS3-207ENST00000494327 FCGR3BO75015 233 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 AADACP22760 399 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 RAB9AP51151 201 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 RORCP51449 518 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 OR2B11Q5JQS5 317 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 FOXB2Q5VYV0 432 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 KCTD9Q7L273 389 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 SECTM1Q8WVN6 248 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 C4orf3Q8WVX3 66 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 ARPC1AQ92747 370 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 SNAPC3Q92966 411 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 MRPS7Q9Y2R9 242 aaKnown RBP17.08■□□□□ 0.32
HPS3-207ENST00000494327 PRELID3BQ9Y3B1 194 aa17.08■□□□□ 0.32
HPS3-207ENST00000494327 ARPC1BO15143 372 aaKnown RBP17.07■□□□□ 0.32
HPS3-207ENST00000494327 SOX15O60248 233 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 IGLV2-14P01704 120 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 CRYGBP07316 175 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 CRIP2P52943 208 aaPredicted RBP17.07■□□□□ 0.32
HPS3-207ENST00000494327 RPL30P62888 115 aaKnown RBP17.07■□□□□ 0.32
HPS3-207ENST00000494327 VMA21Q3ZAQ7 101 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 ACTBL2Q562R1 376 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 C19orf54Q5BKX5 351 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 TCTEX1D1Q8N7M0 179 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 ZNF491Q8N8L2 437 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 OR5AP2Q8NGF4 316 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 UBE2E2Q96LR5 201 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 GNB4Q9HAV0 340 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 VSIG4Q9Y279 399 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 NOTCH1P46531 2555 aa17.07■□□□□ 0.32
HPS3-207ENST00000494327 H3BMQ9 156 aa17.06■□□□□ 0.32
HPS3-207ENST00000494327 DUS4LO95620 317 aaKnown RBP17.06■□□□□ 0.32
HPS3-207ENST00000494327 PRSS3P35030 304 aa17.06■□□□□ 0.32
HPS3-207ENST00000494327 KIAA0141Q14154 515 aaPredicted RBP17.06■□□□□ 0.32
HPS3-207ENST00000494327 CDK10Q15131 360 aa17.06■□□□□ 0.32
HPS3-207ENST00000494327 AKIRIN2Q53H80 203 aa17.06■□□□□ 0.32
HPS3-207ENST00000494327 MYOZ3Q8TDC0 251 aa17.06■□□□□ 0.32
HPS3-207ENST00000494327 TCTEX1D2Q8WW35 142 aa17.06■□□□□ 0.32
HPS3-207ENST00000494327 ACOT12Q8WYK0 555 aa17.06■□□□□ 0.32
HPS3-207ENST00000494327 GPHA2Q96T91 129 aa17.06■□□□□ 0.32
HPS3-207ENST00000494327 CCL28Q9NRJ3 127 aa17.06■□□□□ 0.32
HPS3-207ENST00000494327 TAS2R8Q9NYW2 309 aa17.06■□□□□ 0.32
HPS3-207ENST00000494327 HPGDSO60760 199 aa17.05■□□□□ 0.32
HPS3-207ENST00000494327 PPYP01298 95 aa17.05■□□□□ 0.32
HPS3-207ENST00000494327 FXYD4P59646 89 aa17.05■□□□□ 0.32
HPS3-207ENST00000494327 IDO2Q6ZQW0 420 aa17.05■□□□□ 0.32
HPS3-207ENST00000494327 OR11H1Q8NG94 326 aa17.05■□□□□ 0.32
HPS3-207ENST00000494327 MS4A10Q96PG2 267 aa17.05■□□□□ 0.32
HPS3-207ENST00000494327 HSD17B10Q99714 261 aaKnown RBP17.05■□□□□ 0.32
HPS3-207ENST00000494327 TNFSF12O43508 249 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 APOA1P02647 267 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 CD40LGP29965 261 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 UBE2KP61086 200 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 SPCS2Q15005 226 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 MZT2AQ6P582 158 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 MFSD4AQ8N468 514 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 TEX45Q8NA69 505 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 OR5T1Q8NG75 326 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 OSR1Q8TAX0 266 aaPredicted RBP17.04■□□□□ 0.32
HPS3-207ENST00000494327 SLC5A7Q9GZV3 580 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 ZNF355PQ9NSJ1 428 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 EHFQ9NZC4 300 aa17.04■□□□□ 0.32
HPS3-207ENST00000494327 FAM25AB3EWG3 89 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms