RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 HLA-DRB1P01911 266 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 RCVRNP35243 200 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 BRWD1-AS2P59051 145 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 CD83Q01151 205 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 DYRK1AQ13627 763 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 OVCH2Q7RTZ1 564 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 MCFD2Q8NI22 146 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 GIMAP1Q8WWP7 306 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 ZNF2Q9BSG1 426 aaPredicted RBP9.16□□□□□ -0.94
UBA3-211ENST00000493957 SLC5A7Q9GZV3 580 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 NXF2Q9GZY0 626 aaKnown RBP9.16□□□□□ -0.94
UBA3-211ENST00000493957 FXYD6Q9H0Q3 95 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 SCPEP1Q9HB40 452 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 TAS2R8Q9NYW2 309 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 KIAA1456Q9P272 454 aa9.16□□□□□ -0.94
UBA3-211ENST00000493957 METTL1Q9UBP6 276 aaKnown RBP9.16□□□□□ -0.94
UBA3-211ENST00000493957 RSL24D1Q9UHA3 163 aaKnown RBP9.16□□□□□ -0.94
UBA3-211ENST00000493957 G3V318 75 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 M0QZ24 198 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 AP4M1O00189 453 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 FCGR3BO75015 233 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 RBBP9O75884 186 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 CRYZL1O95825 349 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 TAS2R46P59540 309 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 SSBP2P81877 361 aaPredicted RBP9.15□□□□□ -0.94
UBA3-211ENST00000493957 PJVKQ0ZLH3 352 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 PLGLAQ15195 96 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 MRGPRG-AS1Q2M3A8 158 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 TMEM177Q53S58 311 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 FOXB2Q5VYV0 432 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 LIN54Q6MZP7 749 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 ZNF818PQ6ZRF7 136 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 C18orf65Q6ZTR6 163 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 KCTD9Q7L273 389 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 FOXRED2Q8IWF2 684 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 FAM110DQ8TAY7 271 aaPredicted RBP9.15□□□□□ -0.94
UBA3-211ENST00000493957 TCTEX1D2Q8WW35 142 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 FLYWCH2Q96CP2 140 aaKnown RBP9.15□□□□□ -0.94
UBA3-211ENST00000493957 DIRAS2Q96HU8 199 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 HARBI1Q96MB7 349 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 OR51J1Q9H342 316 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 PARP11Q9NR21 331 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 WSB1Q9Y6I7 421 aa9.15□□□□□ -0.94
UBA3-211ENST00000493957 NOTCH3Q9UM47 2321 aa9.15□□□□□ -0.95
UBA3-211ENST00000493957 TCRBV4S1A1TA0A5B7 111 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 SULT1C2O00338 296 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 KCNAB3O43448 404 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 CA2P00918 260 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 CRYGBP07316 175 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 CSF1P09603 554 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 EGR2P11161 476 aaPredicted RBP9.14□□□□□ -0.95
UBA3-211ENST00000493957 GNRHRP30968 328 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 TNFSF8P32971 234 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 HERV-K104P61576 105 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 CX3CL1P78423 397 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 CFHR3Q02985 330 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 RTL8BQ17RB0 113 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 C2orf68Q2NKX9 166 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 KHDC1LQ5JSQ8 128 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 DHRS11Q6UWP2 260 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 IDO2Q6ZQW0 420 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 KRTAP19-1Q8IUB9 90 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 OR4D10Q8NGI6 311 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 CHPT1Q8WUD6 406 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 MOB3AQ96BX8 217 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 ADTRPQ96IZ2 230 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 TSNAXQ99598 290 aaKnown RBP9.14□□□□□ -0.95
UBA3-211ENST00000493957 RNF5Q99942 180 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 FAM103A1Q9BTL3 118 aaKnown RBP9.14□□□□□ -0.95
UBA3-211ENST00000493957 TINAGL1Q9GZM7 467 aaPredicted RBP9.14□□□□□ -0.95
UBA3-211ENST00000493957 MTFP1Q9UDX5 166 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 NOTCH1P46531 2555 aa9.14□□□□□ -0.95
UBA3-211ENST00000493957 DPPA5A6NC42 116 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 ARPC1BO15143 372 aaKnown RBP9.13□□□□□ -0.95
UBA3-211ENST00000493957 SHOXO15266 292 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 SPDEFO95238 335 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 CD3DP04234 171 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 IGF1P05019 195 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 TAGLNQ01995 201 aaKnown RBP9.13□□□□□ -0.95
UBA3-211ENST00000493957 IL18Q14116 193 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 C19orf54Q5BKX5 351 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 NDUFA11Q86Y39 141 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 VKORC1L1Q8N0U8 176 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 MFSD4AQ8N468 514 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 OR4X2Q8NGF9 303 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 A3GALT2U3KPV4 340 aa9.13□□□□□ -0.95
UBA3-211ENST00000493957 GABARAPH6UMI1 98 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 RAMP3O60896 148 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 SLC22A5O76082 557 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 RPLP1P05386 114 aaKnown RBP9.12□□□□□ -0.95
UBA3-211ENST00000493957 RRASP10301 218 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 GNB1P62873 340 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 ECSCRQ19T08 205 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 FAAP20Q6NZ36 180 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 ZNF66Q6ZN08 573 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 OR51H1Q8NH63 302 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 ABHD5Q8WTS1 349 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 CASTOR1Q8WTX7 329 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 SMIM4Q8WVI0 70 aa9.12□□□□□ -0.95
UBA3-211ENST00000493957 FCAMRQ8WWV6 532 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms