RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 SZT2Q5T011 3432 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 VGLL3A8MV65 326 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 C15orf65H3BRN8 121 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 H3BSA7 217 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 AZIN1O14977 448 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 CD5P06127 495 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 FBP1P09467 338 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 OCM2P0CE71 109 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 CD79BP40259 229 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 CDKL4Q5MAI5 379 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 SCGB1D4Q6XE38 83 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 FAM19A5Q7Z5A7 132 aaPredicted RBP3.28□□□□□ -1.88
SMC2-205ENST00000493955 YIPF7Q8N8F6 280 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 OR11G2Q8NGC1 345 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 CYGBQ8WWM9 190 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 PACRGQ96M98 296 aaPredicted RBP3.28□□□□□ -1.88
SMC2-205ENST00000493955 KCTD7Q96MP8 289 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 EBNA1BP2Q99848 306 aaKnown RBP3.28□□□□□ -1.88
SMC2-205ENST00000493955 ARL6Q9H0F7 186 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 GTSF1LQ9H1H1 148 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 DUSP21Q9H596 190 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 OR5V1Q9UGF6 321 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 RPUSD1Q9UJJ7 312 aaKnown RBP3.28□□□□□ -1.88
SMC2-205ENST00000493955 PHLDA3Q9Y5J5 127 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 SNX10Q9Y5X0 201 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 FOCADQ5VW36 1801 aa3.28□□□□□ -1.88
SMC2-205ENST00000493955 SHROOM3Q8TF72 1996 aa3.28□□□□□ -1.89
SMC2-205ENST00000493955 D6RAR5 112 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 COX5BP10606 129 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 PSKH1P11801 424 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 IFNGR2P38484 337 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 PSMB3P49720 205 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 FOXA1P55317 472 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 SPATA31B1PQ5VZV4 182 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 ZNF721Q8TF20 911 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 MROQ9BYG7 248 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 MS4A6AQ9H2W1 248 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 C11orf49Q9H6J7 331 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 TRBV24-1A0A075B6N3 115 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 K7EQS6 105 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 SH2D1AO60880 128 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 IGKV1-17P01599 117 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 IGHMP01871 453 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 HBZP02008 142 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 RNASE2P10153 161 aaKnown RBP3.27□□□□□ -1.89
SMC2-205ENST00000493955 CTLA4P16410 223 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 DAD1P61803 113 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 UBE2IP63279 158 aaKnown RBP3.27□□□□□ -1.89
SMC2-205ENST00000493955 MAPK14Q16539 360 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 AMMECR1LQ6DCA0 310 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 CYHR1Q6ZMK1 362 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 TMEM75Q8N9X5 138 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 OR51H1Q8NH63 302 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 ABCG5Q9H222 651 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 PARVAQ9NVD7 372 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 ASF1BQ9NVP2 202 aa3.27□□□□□ -1.89
SMC2-205ENST00000493955 ZNF443Q9Y2A4 671 aaPredicted RBP3.27□□□□□ -1.89
SMC2-205ENST00000493955 PARP14Q460N5 1801 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 GBF1Q92538 1859 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 COL6A3P12111 3177 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 CEP290O15078 2479 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 IGKV1D-17A0A075B6S4 117 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 C4orf51C9J302 202 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 EEF1E1O43324 174 aaKnown RBP3.26□□□□□ -1.89
SMC2-205ENST00000493955 SSNA1O43805 119 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 KLHL2O95198 593 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 LINC00614P0C842 121 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 CCL5P13501 91 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 GABRA3P34903 492 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 H2BFSP57053 126 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 SLC9A3R2Q15599 337 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 PTRHD1Q6GMV3 140 aaKnown RBP3.26□□□□□ -1.89
SMC2-205ENST00000493955 Q6ZRU5 148 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 Q8N402 240 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 DHRS9Q9BPW9 319 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 SLC23A2Q9UGH3 650 aa3.26□□□□□ -1.89
SMC2-205ENST00000493955 RFX7Q2KHR2 1363 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 IGKV1-12A0A0C4DH73 117 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 IGKV1D-12P01611 117 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 KRT7P08729 469 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 HRES1P13985 223 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 FKBP1AP62942 108 aaKnown RBP3.25□□□□□ -1.89
SMC2-205ENST00000493955 DHRS2Q13268 280 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 KRTAP25-1Q3LHN0 102 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 MESTQ5EB52 335 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 C10orf91Q5T1B1 145 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 LRP11Q86VZ4 500 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 OR10D3Q8NH80 312 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 SLC37A2Q8TED4 501 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 ASB13Q8WXK3 278 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 HIST1H2BAQ96A08 127 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 MBOAT7Q96N66 472 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 LINC00588Q9Y4M8 146 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 V9GYY5 206 aaPredicted RBP3.25□□□□□ -1.89
SMC2-205ENST00000493955 A0A0G2JMZ2 1700 aa3.25□□□□□ -1.89
SMC2-205ENST00000493955 COL11A1P12107 1806 aaPredicted RBP3.24□□□□□ -1.89
SMC2-205ENST00000493955 MYH1P12882 1939 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 GGTLC3B5MD39 225 aa3.24□□□□□ -1.89
SMC2-205ENST00000493955 PFDN6O15212 129 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms