RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 OR2G6Q5TZ20 316 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 TEX45Q8NA69 505 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 CACNG8Q8WXS5 425 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 PGLYRP3Q96LB9 341 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 SLC29A1Q99808 456 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 BABAM2Q9NXR7 383 aa10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 EXOSC1Q9Y3B2 195 aaKnown RBP10.57□□□□□ -0.72
PRPF40A-211ENST00000493468 A0A1B0GVY2 172 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 MPPED1O15442 326 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 LALBAP00709 142 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 PRH1P02810 166 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 DCKP27707 260 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 ETV1P50549 477 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 RPS27AP62979 156 aaKnown RBP10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 TNXAQ16473 311 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 PRSS8Q16651 343 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 C15orf32Q32M92 178 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 ZIK1Q3SY52 487 aaPredicted RBP10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 OR4A47Q6IF82 309 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 TTC9CQ8N5M4 171 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 SETD6Q8TBK2 473 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 TM2D1Q9BX74 207 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 TMEM59Q9BXS4 323 aa10.56□□□□□ -0.72
PRPF40A-211ENST00000493468 SRRM4A7MD48 611 aaKnown RBP10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 DYNC1I1O14576 645 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 SHOXO15266 292 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 SCAF4O95104 1147 aaKnown RBP10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 OR2C1O95371 312 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 HLA-AP01891 365 aaKnown RBP10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 UBE2KP61086 200 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 VMA21Q3ZAQ7 101 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 STPG3Q8N7X2 389 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 UXS1Q8NBZ7 420 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 OR1L6Q8NGR2 347 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 DERL3Q96Q80 235 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 SPIN2AQ99865 258 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 SPIN2BQ9BPZ2 258 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 MFFQ9GZY8 342 aa10.55□□□□□ -0.72
PRPF40A-211ENST00000493468 RRASP10301 218 aa10.54□□□□□ -0.72
PRPF40A-211ENST00000493468 HTR2CP28335 458 aa10.54□□□□□ -0.72
PRPF40A-211ENST00000493468 RTL8BQ17RB0 113 aa10.54□□□□□ -0.72
PRPF40A-211ENST00000493468 FAM106AQ4KMX7 169 aa10.54□□□□□ -0.72
PRPF40A-211ENST00000493468 BTNL8Q6UX41 500 aa10.54□□□□□ -0.72
PRPF40A-211ENST00000493468 SLC25A42Q86VD7 318 aa10.54□□□□□ -0.72
PRPF40A-211ENST00000493468 OR2C3Q8N628 320 aa10.54□□□□□ -0.72
PRPF40A-211ENST00000493468 APH1BQ8WW43 257 aa10.54□□□□□ -0.72
PRPF40A-211ENST00000493468 MARC2Q969Z3 335 aa10.54□□□□□ -0.72
PRPF40A-211ENST00000493468 RDH8Q9NYR8 311 aa10.54□□□□□ -0.72
PRPF40A-211ENST00000493468 ZNF257Q9Y2Q1 563 aa10.54□□□□□ -0.72
PRPF40A-211ENST00000493468 A0A1W2PPK0 400 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 CREBL2O60519 120 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 OR2J3O76001 311 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 SCTP09683 121 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 C8orf88P0DMB2 117 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 ARL3P36405 182 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 C1orf146Q5VVC0 180 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 SLC38A6Q8IZM9 456 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 FBLIM1Q8WUP2 373 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 ACOT12Q8WYK0 555 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 CCDC140Q96MF4 163 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 NICN1Q9BSH3 213 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 C11orf68Q9H3H3 251 aaKnown RBP10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 Q9N2K0 584 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 PLEKHJ1Q9NW61 149 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 SDHAF2Q9NX18 166 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 SELENOKQ9Y6D0 94 aa10.53□□□□□ -0.72
PRPF40A-211ENST00000493468 IGKV1-6A0A0C4DH72 117 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 IRGMA1A4Y4 181 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 IFNA4P05014 189 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 MYL12AP19105 171 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 SRMP19623 302 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 SERPINB10P48595 397 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 UNC119Q13432 240 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 TPBGQ13641 420 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 RBMS2Q15434 407 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 OR10K2Q6IF99 312 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 RBPMS2Q6ZRY4 209 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 ZNF485Q8NCK3 441 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 OSR1Q8TAX0 266 aaPredicted RBP10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 C2CD4CQ8TF44 421 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 HDHD3Q9BSH5 251 aaPredicted RBP10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 OR2D2Q9H210 308 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 C12orf4Q9NQ89 552 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 AK3Q9UIJ7 227 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 FBXL7Q9UJT9 491 aa10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 DIMT1Q9UNQ2 313 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-211ENST00000493468 ZNF320A2RRD8 509 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 ACTL6BO94805 426 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 CD1AP06126 327 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 GALP22466 123 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 MAPK3P27361 379 aaPredicted RBP10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 TAS2R43P59537 309 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 KLK9Q2XQG4 91 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 C1orf100Q5SVJ3 147 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 TTC23Q5W5X9 447 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 IDO2Q6ZQW0 420 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 MMD2Q8IY49 270 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 GVQW1Q8N7I0 195 aa10.51□□□□□ -0.73
PRPF40A-211ENST00000493468 ZFP41Q8N8Y5 198 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms