RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 IGHV3-23P01764 117 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 HLA-AP01891 365 aaKnown RBP6.8□□□□□ -1.32
HDAC3-211ENST00000491581 HSPB1P04792 205 aaKnown RBP6.8□□□□□ -1.32
HDAC3-211ENST00000491581 HIST1H1DP16402 221 aaKnown RBP6.8□□□□□ -1.32
HDAC3-211ENST00000491581 TGFBR1P36897 503 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 SYNJ2BPP57105 145 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 PITPNAQ00169 270 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 AKIRIN2Q53H80 203 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 ADAMTSL5Q6ZMM2 481 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 PDPNQ86YL7 162 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 OR56B1Q8NGI3 324 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 OR4A4PQ8NGN8 299 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 DDB2Q92466 427 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 FLYWCH2Q96CP2 140 aaKnown RBP6.8□□□□□ -1.32
HDAC3-211ENST00000491581 CHCHD6Q9BRQ6 235 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 CABLES2Q9BTV7 478 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 WFDC10AQ9H1F0 79 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 ATG5Q9H1Y0 275 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 RAB22AQ9UL26 194 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 DYNC2H1Q8NCM8 4307 aaKnown RBP6.8□□□□□ -1.32
HDAC3-211ENST00000491581 A0A1B0GW64 132 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 TMEM235A6NFC5 223 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 HMX3A6NHT5 357 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 SHOXO15266 292 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 APOA2P02652 100 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 IGHV4-30-4P0DP06 118 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 RAB3BP20337 219 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 DUTP33316 252 aaKnown RBP6.79□□□□□ -1.32
HDAC3-211ENST00000491581 SMCPP49901 116 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-211ENST00000491581 BRWD1-AS2P59051 145 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 MXD1Q05195 221 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 ARFRP1Q13795 201 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 TBCEQ15813 527 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-211ENST00000491581 TNXAQ16473 311 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 ZNF367Q7RTV3 350 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 ZNF429Q86V71 674 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 H1FOOQ8IZA3 346 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-211ENST00000491581 POC5Q8NA72 575 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 OR5H6Q8NGV6 325 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 OR10J5Q8NHC4 309 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 ACOT12Q8WYK0 555 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 TSNAXQ99598 290 aaKnown RBP6.79□□□□□ -1.32
HDAC3-211ENST00000491581 ST6GALNAC5Q9BVH7 336 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 OR51E2Q9H255 320 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 RIMS4Q9H426 269 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-211ENST00000491581 NDUFB11Q9NX14 153 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 COA4Q9NYJ1 87 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 TENM3Q9P273 2699 aa6.79□□□□□ -1.32
HDAC3-211ENST00000491581 RYR2Q92736 4967 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 TRDV1A0A1B0GX56 115 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 MEIS3P1A6NDR6 274 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 PPP5D1E7EU14 171 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 RBBP9O75884 186 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 TUSC2O75896 110 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 IGLV1-51P01701 117 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 NHLRC4P0CG21 123 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-211ENST00000491581 SAA1P0DJI8 122 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-211ENST00000491581 PSMB9P28065 219 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 TMEM267Q0VDI3 215 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-211ENST00000491581 TRAM1Q15629 374 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 CDNFQ49AH0 187 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 TMEM177Q53S58 311 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 CASC10Q5T4H9 136 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 SPARTQ8N0X7 666 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 GVQW1Q8N7I0 195 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 LGALS14Q8TCE9 139 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 OR4C12Q96R67 309 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 PHB2Q99623 299 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 FAM110AQ9BQ89 295 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 GINS4Q9BRT9 223 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 ZNF430Q9H8G1 570 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-211ENST00000491581 AKIP1Q9NQ31 210 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 ZC4H2Q9NQZ6 224 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 TXNL4BQ9NX01 149 aaKnown RBP6.78□□□□□ -1.32
HDAC3-211ENST00000491581 DAPK2Q9UIK4 370 aa6.78□□□□□ -1.32
HDAC3-211ENST00000491581 RBM7Q9Y580 266 aaKnown RBP6.78□□□□□ -1.32
HDAC3-211ENST00000491581 SACSQ9NZJ4 4579 aa6.77□□□□□ -1.32
HDAC3-211ENST00000491581 TRAV1-2A0A0B4J238 106 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 C13orf42A0A1B0GVH6 325 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 BMPR1BO00238 502 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 TNFSF12O43508 249 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 FCGR3BO75015 233 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 SPDEFO95238 335 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 REG1AP05451 166 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 CSN3P07498 182 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 MYL9P24844 172 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 KLF5Q13887 457 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-211ENST00000491581 PRSS8Q16651 343 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 ADAD2Q8NCV1 583 aaKnown RBP6.77□□□□□ -1.33
HDAC3-211ENST00000491581 SRSF12Q8WXF0 261 aaKnown RBP6.77□□□□□ -1.33
HDAC3-211ENST00000491581 CACNG8Q8WXS5 425 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 SPATA2Q9UM82 520 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 DNAH7Q8WXX0 4024 aa6.77□□□□□ -1.33
HDAC3-211ENST00000491581 STARD9Q9P2P6 4700 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 SORL1Q92673 2214 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 TRAV3A0A0B4J244 114 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 CGB1A6NKQ9 187 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 OR2J3O76001 311 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 ATP6V1G2O95670 118 aa6.76□□□□□ -1.33
HDAC3-211ENST00000491581 RPA2P15927 270 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms