RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 NAV3Q8IVL0 2385 aa17.52■□□□□ 0.4
VCPKMT-204ENST00000491402 SETD2Q9BYW2 2564 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 IGHV3-72A0A0B4J1Y9 119 aa17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 APOA2P02652 100 aa17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 SERPINE2P07093 398 aa17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 KIR2DS2P43631 304 aa17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 TAGLNQ01995 201 aaKnown RBP17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 MS4A7Q9GZW8 240 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 FAM212BQ9NTI7 297 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 SOX21Q9Y651 276 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 RBFOX2O43251 390 aaKnown RBP eCLIP17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 IGKV1-16P04430 117 aa17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 HNF1AP20823 631 aa17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 HABP2Q14520 560 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 RTL8BQ17RB0 113 aa17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 CFHR4Q92496 578 aa17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 PHB2Q99623 299 aa17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 OR51J1Q9H342 316 aa17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 FAM96BQ9Y3D0 163 aa17.51■□□□□ 0.39
VCPKMT-204ENST00000491402 A0A1B0GVG6 124 aa17.5■□□□□ 0.39
VCPKMT-204ENST00000491402 H7C2Y5 167 aa17.5■□□□□ 0.39
VCPKMT-204ENST00000491402 MC5RP33032 325 aa17.5■□□□□ 0.39
VCPKMT-204ENST00000491402 LIAT1Q6ZQX7 453 aa17.5■□□□□ 0.39
VCPKMT-204ENST00000491402 OR4S2Q8NH73 311 aa17.5■□□□□ 0.39
VCPKMT-204ENST00000491402 LHFPL5Q8TAF8 219 aa17.5■□□□□ 0.39
VCPKMT-204ENST00000491402 WASHC3Q9Y3C0 194 aa17.5■□□□□ 0.39
VCPKMT-204ENST00000491402 CDS2O95674 445 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 CRYZL1O95825 349 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 FBP1P09467 338 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 SRP14P37108 136 aaKnown RBP17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 RAB13P51153 203 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 ARHGDIBP52566 201 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 LIN54Q6MZP7 749 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 C9orf139Q6ZV77 190 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 PDPNQ86YL7 162 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 COQ8AQ8NI60 647 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 TMEM56Q96MV1 263 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 CDC42EP3Q9UKI2 254 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 TMEM56-RWDD3S4R434 201 aa17.49■□□□□ 0.39
VCPKMT-204ENST00000491402 RRASP10301 218 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 SRPXP78539 464 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 DHRS7BQ6IAN0 325 aaPredicted RBP17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 BCL6BQ8N143 479 aaPredicted RBP17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 C12orf45Q8N5I9 185 aaPredicted RBP17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 C22orf15Q8WYQ4 148 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 hCG_2014768A0A024R1R8 64 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 S1PR2O95136 353 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 IGKV1-39P01597 117 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 IGKV1D-39P04432 117 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 RPA2P15927 270 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 LPAR6P43657 344 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 TMEM268Q5VZI3 342 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 LURAP1LQ8IV03 231 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 LGI3Q8N145 548 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 LRTM2Q8N967 370 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 UXS1Q8NBZ7 420 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 RBPMSQ93062 196 aaKnown RBP17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 MEGF9Q9H1U4 602 aa17.48■□□□□ 0.39
VCPKMT-204ENST00000491402 A0A0B4J2A0 478 aa17.47■□□□□ 0.39
VCPKMT-204ENST00000491402 SSNA1O43805 119 aa17.47■□□□□ 0.39
VCPKMT-204ENST00000491402 VENTXO95231 258 aa17.47■□□□□ 0.39
VCPKMT-204ENST00000491402 HPRT1P00492 218 aa17.47■□□□□ 0.39
VCPKMT-204ENST00000491402 CD1BP29016 333 aa17.47■□□□□ 0.39
VCPKMT-204ENST00000491402 ZNF695Q8IW36 515 aa17.47■□□□□ 0.39
VCPKMT-204ENST00000491402 OR4C13Q8NGP0 309 aa17.47■□□□□ 0.39
VCPKMT-204ENST00000491402 PLEKHA2Q9HB19 425 aa17.47■□□□□ 0.39
VCPKMT-204ENST00000491402 SHPKQ9UHJ6 478 aa17.47■□□□□ 0.39
VCPKMT-204ENST00000491402 CD24P25063 80 aa17.46■□□□□ 0.39
VCPKMT-204ENST00000491402 SELENOHQ8IZQ5 122 aaKnown RBP17.46■□□□□ 0.39
VCPKMT-204ENST00000491402 IL22RA2Q969J5 263 aa17.46■□□□□ 0.39
VCPKMT-204ENST00000491402 FLYWCH2Q96CP2 140 aaKnown RBP17.46■□□□□ 0.39
VCPKMT-204ENST00000491402 DBX1A6NMT0 343 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 VGLL3A8MV65 326 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 CRLF1O75462 422 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 IGKV1D-33P01593 117 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 IGKV1-33P01594 117 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 BRS3P32247 399 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 SLC35G3Q8N808 338 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 MDFIC2A0A1B0GVS7 189 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 FAM90A9PA6NNJ1 464 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 SNRNP70P08621 437 aaKnown RBP17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 DEFB112Q30KQ8 113 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 TMEM177Q53S58 311 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 LYZL2Q7Z4W2 148 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 OSR1Q8TAX0 266 aaPredicted RBP17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 HARBI1Q96MB7 349 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 COMMD9Q9P000 198 aa17.45■□□□□ 0.38
VCPKMT-204ENST00000491402 SRD5A1P18405 259 aa17.44■□□□□ 0.38
VCPKMT-204ENST00000491402 DYNLT3P51808 116 aa17.44■□□□□ 0.38
VCPKMT-204ENST00000491402 CADM3Q8N126 398 aa17.44■□□□□ 0.38
VCPKMT-204ENST00000491402 PIGBOS1A0A0B4J2F0 54 aa17.43■□□□□ 0.38
VCPKMT-204ENST00000491402 MARCH11A6NNE9 402 aa17.43■□□□□ 0.38
VCPKMT-204ENST00000491402 SHOXO15266 292 aa17.43■□□□□ 0.38
VCPKMT-204ENST00000491402 KRASP01116 189 aa17.43■□□□□ 0.38
VCPKMT-204ENST00000491402 G6PCP35575 357 aa17.43■□□□□ 0.38
VCPKMT-204ENST00000491402 FBLN7Q53RD9 439 aa17.43■□□□□ 0.38
VCPKMT-204ENST00000491402 R3HDM4Q96D70 268 aa17.43■□□□□ 0.38
VCPKMT-204ENST00000491402 SEC22AQ96IW7 307 aa17.43■□□□□ 0.38
VCPKMT-204ENST00000491402 RITA1Q96K30 269 aa17.43■□□□□ 0.38
VCPKMT-204ENST00000491402 MED28Q9H204 178 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms