RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 HES5Q5TA89 166 aa12.63□□□□□ -0.39
SRGAP3-209ENST00000490889 ADAMTSL5Q6ZMM2 481 aa12.63□□□□□ -0.39
SRGAP3-209ENST00000490889 SPATA25Q9BR10 227 aa12.63□□□□□ -0.39
SRGAP3-209ENST00000490889 DUSP21Q9H596 190 aa12.63□□□□□ -0.39
SRGAP3-209ENST00000490889 COA4Q9NYJ1 87 aa12.63□□□□□ -0.39
SRGAP3-209ENST00000490889 SHOXO15266 292 aa12.62□□□□□ -0.39
SRGAP3-209ENST00000490889 MLLT11Q13015 90 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-209ENST00000490889 ADAD2Q8NCV1 583 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-209ENST00000490889 DDB2Q92466 427 aa12.62□□□□□ -0.39
SRGAP3-209ENST00000490889 TMEM68Q96MH6 324 aa12.62□□□□□ -0.39
SRGAP3-209ENST00000490889 ZNF230Q9UIE0 474 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-209ENST00000490889 V9GY05 133 aa12.62□□□□□ -0.39
SRGAP3-209ENST00000490889 SHISA3A0PJX4 238 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 MSGN1A6NI15 193 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 LINC00473A8K010 186 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 H0Y980 276 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 GNB3P16520 340 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 AADACP22760 399 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 AQP4P55087 323 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 TRAM1Q15629 374 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 IDO2Q6ZQW0 420 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 OR10J5Q8NHC4 309 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 RAB3CQ96E17 227 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 RETNQ9HD89 108 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 SIGLEC8Q9NYZ4 499 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 NKX1-2Q9UD57 310 aaPredicted RBP12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 RAB22AQ9UL26 194 aa12.61□□□□□ -0.39
SRGAP3-209ENST00000490889 IGKV1D-8A0A087WSZ0 117 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 ANKRD65E5RJM6 399 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 RAB27BO00194 218 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 MFNGO00587 321 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 RGS10O43665 173 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 PRH1P02810 166 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 PSMA1P25786 263 aaKnown RBP12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 DUTP33316 252 aaKnown RBP12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 MAP2K4P45985 399 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 MECP2P51608 486 aaKnown RBP12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 OR10A3P58181 314 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 ZNF45Q02386 682 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 PRSS8Q16651 343 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 NRG4Q8WWG1 115 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 SRSF12Q8WXF0 261 aaKnown RBP12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 USMG5Q96IX5 58 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 PHB2Q99623 299 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 VCXQ9H320 206 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 TPRKBQ9Y3C4 175 aa12.6□□□□□ -0.39
SRGAP3-209ENST00000490889 A0A075B6Q4 140 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 A0A0B4J203 849 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 BMPR1BO00238 502 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 CRYZL1O95825 349 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 OR9G9P0C7N8 305 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 UBE2KP61086 200 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 TNXAQ16473 311 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 RTL8BQ17RB0 113 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 RPEL1Q2QD12 228 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 LCN12Q6JVE5 192 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 Q8N402 240 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 TEX45Q8NA69 505 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 OR10R2Q8NGX6 335 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 MGLLQ99685 303 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 AKIP1Q9NQ31 210 aa12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 ELF5Q9UKW6 265 aaPredicted RBP12.59□□□□□ -0.39
SRGAP3-209ENST00000490889 OR2A4O95047 310 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 DIRAS3O95661 229 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 HIST1H1DP16402 221 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 EDN2P20800 178 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 MRPS15P82914 257 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 RHOGP84095 191 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 TAGLNQ01995 201 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 CBX3Q13185 183 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 SSX1Q16384 188 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 VMA21Q3ZAQ7 101 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 C10orf55Q5SWW7 151 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 LINC00322Q6ZN03 302 aaPredicted RBP12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 GTSCR1Q86UQ5 136 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 H1FOOQ8IZA3 346 aaPredicted RBP12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 ACOT12Q8WYK0 555 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 CCDC90BQ9GZT6 254 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 TUBA4BQ9H853 241 aa12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 ZNF430Q9H8G1 570 aaPredicted RBP12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 RBM7Q9Y580 266 aaKnown RBP12.58□□□□□ -0.4
SRGAP3-209ENST00000490889 TRBV9A0A0B4J1U6 114 aa12.57□□□□□ -0.4
SRGAP3-209ENST00000490889 RRASP10301 218 aa12.57□□□□□ -0.4
SRGAP3-209ENST00000490889 CRHBPP24387 322 aa12.57□□□□□ -0.4
SRGAP3-209ENST00000490889 EXOSC2Q13868 293 aaKnown RBP12.57□□□□□ -0.4
SRGAP3-209ENST00000490889 TATDN3Q17R31 274 aa12.57□□□□□ -0.4
SRGAP3-209ENST00000490889 SNAPC3Q92966 411 aa12.57□□□□□ -0.4
SRGAP3-209ENST00000490889 FAM110AQ9BQ89 295 aa12.57□□□□□ -0.4
SRGAP3-209ENST00000490889 GINS4Q9BRT9 223 aa12.57□□□□□ -0.4
SRGAP3-209ENST00000490889 PLEKHA3Q9HB20 300 aa12.57□□□□□ -0.4
SRGAP3-209ENST00000490889 ACOT13Q9NPJ3 140 aa12.57□□□□□ -0.4
SRGAP3-209ENST00000490889 IFITM5A6NNB3 132 aa12.56□□□□□ -0.4
SRGAP3-209ENST00000490889 J3QRK9 145 aa12.56□□□□□ -0.4
SRGAP3-209ENST00000490889 SAA1P0DJI8 122 aaPredicted RBP12.56□□□□□ -0.4
SRGAP3-209ENST00000490889 PSMD7P51665 324 aa12.56□□□□□ -0.4
SRGAP3-209ENST00000490889 CD300EQ496F6 205 aaPredicted RBP12.56□□□□□ -0.4
SRGAP3-209ENST00000490889 PRSS48Q7RTY5 328 aa12.56□□□□□ -0.4
SRGAP3-209ENST00000490889 ADTRPQ96IZ2 230 aa12.56□□□□□ -0.4
SRGAP3-209ENST00000490889 WFDC10AQ9H1F0 79 aa12.56□□□□□ -0.4
SRGAP3-209ENST00000490889 HIPK2Q9H2X6 1198 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms