RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 PTPN13Q12923 2485 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 COL12A1Q99715 3063 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 SYNGR3O43761 229 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 ZNF737O75373 536 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 GDF1P27539 372 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 NTF4P34130 210 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 SRPXP78539 464 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 ACTL10Q5JWF8 245 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 MRPL21Q7Z2W9 205 aaKnown RBP8.64□□□□□ -1.03
BRD9-209ENST00000490814 CMTM2Q8TAZ6 248 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 IMMP2LQ96T52 175 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 CHODLQ9H9P2 273 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 SLC35D1Q9NTN3 355 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 TRAV26-1A0A087WT03 109 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 IGKV1D-13A0A0B4J2D9 117 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 ZNF816-ZNF321PA0A0X1KG74 233 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 LOC102725191A0A1B0GVB3 256 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 GAGE12BA1L429 117 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 C5orf49A4QMS7 147 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 GJE1A6NN92 205 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 SERPINA7P05543 415 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 IGKV1-13P0DP09 117 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 S100GP29377 79 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 CDKN1AP38936 164 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 GABRA2P47869 451 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 PAX2Q02962 417 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 Q6ZWC4 215 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 HS3ST6Q96QI5 342 aa8.64□□□□□ -1.03
BRD9-209ENST00000490814 CISD1Q9NZ45 108 aaKnown RBP8.64□□□□□ -1.03
BRD9-209ENST00000490814 IGLV3-32A0A0A0MS00 114 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 A0A0U1RQK1 487 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 FKBP2P26885 142 aaKnown RBP8.63□□□□□ -1.03
BRD9-209ENST00000490814 PLA2G5P39877 138 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 TPPP2P59282 170 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 RPS16P62249 146 aaKnown RBP8.63□□□□□ -1.03
BRD9-209ENST00000490814 HTD2P86397 168 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 PRDX4Q13162 271 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 ODF1Q14990 250 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 PCOLCEQ15113 449 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 TMEM144Q7Z5S9 345 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 OR10D3Q8NH80 312 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 PRRG4Q9BZD6 226 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 OR2H1Q9GZK4 316 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 OR51I2Q9H344 312 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 DECR2Q9NUI1 292 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 NAT8Q9UHE5 227 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 LOC400499M0QZD8 3231 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 A0A1B0GUS0 222 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 C10orf142B7Z368 130 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 TRAPPC2LH3BP13 241 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 HYPMO75409 117 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 OTX1P32242 354 aaPredicted RBP8.63□□□□□ -1.03
BRD9-209ENST00000490814 IGFBP7Q16270 282 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 OR4F5Q8NH21 305 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 OR4F4Q96R69 305 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 PYGO2Q9BRQ0 406 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 PPP1R3CQ9UQK1 317 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 LRRC3CA6NJW4 275 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 IGLV3-1P01715 115 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 PFN1P07737 140 aaKnown RBP8.63□□□□□ -1.03
BRD9-209ENST00000490814 RFPL3SP0C7P2 107 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 CD59P13987 128 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 CRYGSP22914 178 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 CEACAM3P40198 252 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 UBE2NP61088 152 aaKnown RBP8.63□□□□□ -1.03
BRD9-209ENST00000490814 SHISA2Q6UWI4 295 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 OR1K1Q8NGR3 316 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 OR2T10Q8NGZ9 312 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 C10orf35Q96D05 121 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 ZNF479Q96JC4 524 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 HSPB9Q9BQS6 159 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 ELOVL5Q9NYP7 299 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 PSG11Q9UQ72 335 aa8.63□□□□□ -1.03
BRD9-209ENST00000490814 FREM1Q5H8C1 2179 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 COL4A2P08572 1712 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 ODAMA1E959 279 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 OR6C6A6NF89 314 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 NUPR1O60356 82 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 MT-CO2P00403 227 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 RAB9AP51151 201 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 HES3Q5TGS1 186 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 MKXQ8IYA7 352 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 OR1N2Q8NGR9 330 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 FAM222BQ8WU58 562 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 PSMF1Q92530 271 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 BTF3L4Q96K17 158 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 ERRFI1Q9UJM3 462 aaPredicted RBP8.62□□□□□ -1.03
BRD9-209ENST00000490814 RBFOX2O43251 390 aaKnown RBP eCLIP8.62□□□□□ -1.034e-9■■■■□ 22.7
BRD9-209ENST00000490814 MRPL33O75394 65 aaKnown RBP8.62□□□□□ -1.03
BRD9-209ENST00000490814 RBMXL2O75526 392 aaKnown RBP8.62□□□□□ -1.03
BRD9-209ENST00000490814 IGLC2P0DOY2 106 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 IGLC3P0DOY3 106 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 VDAC1P21796 283 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 NBL1P41271 181 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 CLDN15P56746 228 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 ZFP36L1Q07352 338 aaKnown RBP8.62□□□□□ -1.03
BRD9-209ENST00000490814 BAXQ07812 192 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 SPANXN5Q5MJ07 72 aa8.62□□□□□ -1.03
BRD9-209ENST00000490814 PATZ1Q9HBE1 687 aaKnown RBP8.62□□□□□ -1.03
BRD9-209ENST00000490814 LAMA5O15230 3695 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms