RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 RAB3BP20337 219 aa16.1■□□□□ 0.17
SYNE4-205ENST00000490730 ZP3P21754 424 aa16.1■□□□□ 0.17
SYNE4-205ENST00000490730 NDUFB11Q9NX14 153 aa16.1■□□□□ 0.17
SYNE4-205ENST00000490730 COA4Q9NYJ1 87 aa16.1■□□□□ 0.17
SYNE4-205ENST00000490730 SMIM30A4D0T7 59 aa16.09■□□□□ 0.17
SYNE4-205ENST00000490730 METTL21EPA6NDL7 271 aa16.09■□□□□ 0.17
SYNE4-205ENST00000490730 C3orf84H3BNL1 204 aa16.09■□□□□ 0.17
SYNE4-205ENST00000490730 RAB27BO00194 218 aa16.09■□□□□ 0.17
SYNE4-205ENST00000490730 CRYGBP07316 175 aa16.09■□□□□ 0.17
SYNE4-205ENST00000490730 RAB6AP20340 208 aa16.09■□□□□ 0.17
SYNE4-205ENST00000490730 HSPA13P48723 471 aa16.09■□□□□ 0.17
SYNE4-205ENST00000490730 ATG5Q9H1Y0 275 aa16.09■□□□□ 0.17
SYNE4-205ENST00000490730 ERICH4A6NGS2 130 aa16.08■□□□□ 0.16
SYNE4-205ENST00000490730 J3QRK9 145 aa16.08■□□□□ 0.16
SYNE4-205ENST00000490730 DIRAS3O95661 229 aa16.08■□□□□ 0.16
SYNE4-205ENST00000490730 TAGLNQ01995 201 aaKnown RBP16.08■□□□□ 0.16
SYNE4-205ENST00000490730 VMA21Q3ZAQ7 101 aa16.08■□□□□ 0.16
SYNE4-205ENST00000490730 TMEM177Q53S58 311 aa16.08■□□□□ 0.16
SYNE4-205ENST00000490730 C22orf42Q6IC83 251 aa16.08■□□□□ 0.16
SYNE4-205ENST00000490730 ZMAT4Q9H898 229 aa16.08■□□□□ 0.16
SYNE4-205ENST00000490730 DNAH7Q8WXX0 4024 aa16.08■□□□□ 0.16
SYNE4-205ENST00000490730 TRDV1A0A1B0GX56 115 aa16.07■□□□□ 0.16
SYNE4-205ENST00000490730 SRRM4A7MD48 611 aaKnown RBP16.07■□□□□ 0.16
SYNE4-205ENST00000490730 MPPED1O15442 326 aa16.07■□□□□ 0.16
SYNE4-205ENST00000490730 CRYZL1O95825 349 aa16.07■□□□□ 0.16
SYNE4-205ENST00000490730 RRASP10301 218 aa16.07■□□□□ 0.16
SYNE4-205ENST00000490730 TNXAQ16473 311 aa16.07■□□□□ 0.16
SYNE4-205ENST00000490730 IDO2Q6ZQW0 420 aa16.07■□□□□ 0.16
SYNE4-205ENST00000490730 TMEM68Q96MH6 324 aa16.07■□□□□ 0.16
SYNE4-205ENST00000490730 TINAGL1Q9GZM7 467 aaPredicted RBP16.07■□□□□ 0.16
SYNE4-205ENST00000490730 ELF5Q9UKW6 265 aaPredicted RBP16.07■□□□□ 0.16
SYNE4-205ENST00000490730 IGKV1D-8A0A087WSZ0 117 aa16.06■□□□□ 0.16
SYNE4-205ENST00000490730 MSGN1A6NI15 193 aa16.06■□□□□ 0.16
SYNE4-205ENST00000490730 IGLV1-51P01701 117 aa16.06■□□□□ 0.16
SYNE4-205ENST00000490730 SYNJ2BPP57105 145 aa16.06■□□□□ 0.16
SYNE4-205ENST00000490730 H1FOOQ8IZA3 346 aaPredicted RBP16.06■□□□□ 0.16
SYNE4-205ENST00000490730 MUC7Q8TAX7 377 aa16.06■□□□□ 0.16
SYNE4-205ENST00000490730 ACOT12Q8WYK0 555 aa16.06■□□□□ 0.16
SYNE4-205ENST00000490730 ADTRPQ96IZ2 230 aa16.06■□□□□ 0.16
SYNE4-205ENST00000490730 AADACP22760 399 aa16.05■□□□□ 0.16
SYNE4-205ENST00000490730 DUTP33316 252 aaKnown RBP16.05■□□□□ 0.16
SYNE4-205ENST00000490730 DCUN1D5Q9BTE7 237 aa16.05■□□□□ 0.16
SYNE4-205ENST00000490730 PEF1Q9UBV8 284 aaKnown RBP16.05■□□□□ 0.16
SYNE4-205ENST00000490730 LINC00473A8K010 186 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 TRBV12-3P01733 135 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 IGHV4-30-4P0DP06 118 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 UBE2KP61086 200 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 KLF5Q13887 457 aaPredicted RBP16.04■□□□□ 0.16
SYNE4-205ENST00000490730 PRSS8Q16651 343 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 CDNFQ49AH0 187 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 NR2C2APQ86WQ0 139 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 SGPP2Q8IWX5 399 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 TEX45Q8NA69 505 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 OR9G4Q8NGQ1 327 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 SRSF12Q8WXF0 261 aaKnown RBP16.04■□□□□ 0.16
SYNE4-205ENST00000490730 DDB2Q92466 427 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 CENPOQ9BU64 300 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 ST6GALNAC5Q9BVH7 336 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 ADAM30Q9UKF2 790 aa16.04■□□□□ 0.16
SYNE4-205ENST00000490730 DYRK1AQ13627 763 aa16.03■□□□□ 0.16
SYNE4-205ENST00000490730 ARL6IP1Q15041 203 aa16.03■□□□□ 0.16
SYNE4-205ENST00000490730 MRGPRG-AS1Q2M3A8 158 aa16.03■□□□□ 0.16
SYNE4-205ENST00000490730 OR2B11Q5JQS5 317 aa16.03■□□□□ 0.16
SYNE4-205ENST00000490730 Q6ZS49 121 aa16.03■□□□□ 0.16
SYNE4-205ENST00000490730 USMG5Q96IX5 58 aa16.03■□□□□ 0.16
SYNE4-205ENST00000490730 FCGR3BO75015 233 aa16.02■□□□□ 0.16
SYNE4-205ENST00000490730 ACTL6BO94805 426 aa16.02■□□□□ 0.16
SYNE4-205ENST00000490730 OR9G9P0C7N8 305 aa16.02■□□□□ 0.16
SYNE4-205ENST00000490730 NFYAP23511 347 aaPredicted RBP16.02■□□□□ 0.16
SYNE4-205ENST00000490730 DTYMKP23919 212 aa16.02■□□□□ 0.16
SYNE4-205ENST00000490730 PSMB9P28065 219 aa16.02■□□□□ 0.16
SYNE4-205ENST00000490730 RPEL1Q2QD12 228 aa16.02■□□□□ 0.16
SYNE4-205ENST00000490730 ZNF343Q6P1L6 599 aa16.02■□□□□ 0.16
SYNE4-205ENST00000490730 Q8N1Y9 231 aa16.02■□□□□ 0.16
SYNE4-205ENST00000490730 ADAD2Q8NCV1 583 aaKnown RBP16.02■□□□□ 0.16
SYNE4-205ENST00000490730 OSR1Q8TAX0 266 aaPredicted RBP16.02■□□□□ 0.16
SYNE4-205ENST00000490730 RAB26Q9ULW5 256 aa16.02■□□□□ 0.16
SYNE4-205ENST00000490730 TUSC2O75896 110 aa16.01■□□□□ 0.15
SYNE4-205ENST00000490730 BRI3O95415 125 aa16.01■□□□□ 0.15
SYNE4-205ENST00000490730 PRH1P02810 166 aa16.01■□□□□ 0.15
SYNE4-205ENST00000490730 SAA1P0DJI8 122 aaPredicted RBP16.01■□□□□ 0.15
SYNE4-205ENST00000490730 GALP22466 123 aa16.01■□□□□ 0.15
SYNE4-205ENST00000490730 GABARAPL2P60520 117 aa16.01■□□□□ 0.15
SYNE4-205ENST00000490730 TATDN3Q17R31 274 aa16.01■□□□□ 0.15
SYNE4-205ENST00000490730 CASC10Q5T4H9 136 aa16.01■□□□□ 0.15
SYNE4-205ENST00000490730 KCTD9Q7L273 389 aa16.01■□□□□ 0.15
SYNE4-205ENST00000490730 ZNF645Q8N7E2 425 aa16.01■□□□□ 0.15
SYNE4-205ENST00000490730 NUDCD2Q8WVJ2 157 aa16.01■□□□□ 0.15
SYNE4-205ENST00000490730 ZNF430Q9H8G1 570 aaPredicted RBP16.01■□□□□ 0.15
SYNE4-205ENST00000490730 PALMDQ9NP74 551 aa16.01■□□□□ 0.15
SYNE4-205ENST00000490730 TMEM235A6NFC5 223 aa16■□□□□ 0.15
SYNE4-205ENST00000490730 NOTOA8MTQ0 251 aa16■□□□□ 0.15
SYNE4-205ENST00000490730 H0Y980 276 aa16■□□□□ 0.15
SYNE4-205ENST00000490730 CREBL2O60519 120 aaPredicted RBP16■□□□□ 0.15
SYNE4-205ENST00000490730 RBMXL2O75526 392 aaKnown RBP16■□□□□ 0.15
SYNE4-205ENST00000490730 RHOGP84095 191 aa16■□□□□ 0.15
SYNE4-205ENST00000490730 HACD4Q5VWC8 232 aa16■□□□□ 0.15
SYNE4-205ENST00000490730 IL34Q6ZMJ4 242 aa16■□□□□ 0.15
SYNE4-205ENST00000490730 TXNL4BQ9NX01 149 aaKnown RBP16■□□□□ 0.15
SYNE4-205ENST00000490730 DAPK2Q9UIK4 370 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms