RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 CASTOR1Q8WTX7 329 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 DDB2Q92466 427 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 ANXA10Q9UJ72 324 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 SPATA2Q9UM82 520 aa15.35■□□□□ 0.05
SMC4-222ENST00000490207 LINC00473A8K010 186 aa15.34■□□□□ 0.05
SMC4-222ENST00000490207 ARPC1BO15143 372 aaKnown RBP15.34■□□□□ 0.05
SMC4-222ENST00000490207 OR8U8P0C7N1 319 aa15.34■□□□□ 0.05
SMC4-222ENST00000490207 ZNF616Q08AN1 781 aa15.34■□□□□ 0.05
SMC4-222ENST00000490207 FXYD3Q14802 87 aa15.34■□□□□ 0.05
SMC4-222ENST00000490207 AKIRIN2Q53H80 203 aa15.34■□□□□ 0.05
SMC4-222ENST00000490207 CROCCP3Q8IVE0 287 aa15.34■□□□□ 0.05
SMC4-222ENST00000490207 OR1N2Q8NGR9 330 aa15.34■□□□□ 0.05
SMC4-222ENST00000490207 WI2-2373I1.2A0A1W2PRP0 233 aa15.33■□□□□ 0.04
SMC4-222ENST00000490207 CNIH1O95406 144 aa15.33■□□□□ 0.04
SMC4-222ENST00000490207 CRYZL1O95825 349 aa15.33■□□□□ 0.04
SMC4-222ENST00000490207 HLA-DQB1P01920 261 aa15.33■□□□□ 0.04
SMC4-222ENST00000490207 CRYGBP07316 175 aa15.33■□□□□ 0.04
SMC4-222ENST00000490207 ARPC4P59998 168 aa15.33■□□□□ 0.04
SMC4-222ENST00000490207 LSM3P62310 102 aaKnown RBP15.33■□□□□ 0.04
SMC4-222ENST00000490207 C9orf66Q5T8R8 295 aa15.33■□□□□ 0.04
SMC4-222ENST00000490207 ASPHD1Q5U4P2 390 aa15.33■□□□□ 0.04
SMC4-222ENST00000490207 DIABLOQ9NR28 239 aa15.33■□□□□ 0.04
SMC4-222ENST00000490207 IGKV1D-13A0A0B4J2D9 117 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 SEC14L6B5MCN3 397 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 SLC22A5O76082 557 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 LGALS1P09382 135 aaKnown RBP15.32■□□□□ 0.04
SMC4-222ENST00000490207 IGKV1-13P0DP09 117 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 CD40LGP29965 261 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 TPPP2P59282 170 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 SSBP2P81877 361 aaPredicted RBP15.32■□□□□ 0.04
SMC4-222ENST00000490207 PJVKQ0ZLH3 352 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 VMA21Q3ZAQ7 101 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 KCTD9Q7L273 389 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 GVQW1Q8N7I0 195 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 BEST4Q8NFU0 473 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 ALX4Q9H161 411 aaPredicted RBP15.32■□□□□ 0.04
SMC4-222ENST00000490207 AUNIPQ9H7T9 357 aa15.32■□□□□ 0.04
SMC4-222ENST00000490207 ZMAT5Q9UDW3 170 aaKnown RBP15.32■□□□□ 0.04
SMC4-222ENST00000490207 RBMX2Q9Y388 322 aaKnown RBP15.32■□□□□ 0.04
SMC4-222ENST00000490207 SRRM4A7MD48 611 aaKnown RBP15.31■□□□□ 0.04
SMC4-222ENST00000490207 DGCR2P98153 550 aa15.31■□□□□ 0.04
SMC4-222ENST00000490207 UBE2NLQ5JXB2 153 aa15.31■□□□□ 0.04
SMC4-222ENST00000490207 MS4A10Q96PG2 267 aa15.31■□□□□ 0.04
SMC4-222ENST00000490207 SLA2Q9H6Q3 261 aa15.31■□□□□ 0.04
SMC4-222ENST00000490207 TRIM64CA6NLI5 447 aa15.3■□□□□ 0.04
SMC4-222ENST00000490207 TUSC2O75896 110 aa15.3■□□□□ 0.04
SMC4-222ENST00000490207 PTHLHP12272 177 aa15.3■□□□□ 0.04
SMC4-222ENST00000490207 RPS19P39019 145 aaKnown RBP15.3■□□□□ 0.04
SMC4-222ENST00000490207 UBE2KP61086 200 aa15.3■□□□□ 0.04
SMC4-222ENST00000490207 HOGA1Q86XE5 327 aa15.3■□□□□ 0.04
SMC4-222ENST00000490207 POC5Q8NA72 575 aa15.3■□□□□ 0.04
SMC4-222ENST00000490207 OSR1Q8TAX0 266 aaPredicted RBP15.3■□□□□ 0.04
SMC4-222ENST00000490207 MRPS7Q9Y2R9 242 aaKnown RBP15.3■□□□□ 0.04
SMC4-222ENST00000490207 PRELID3BQ9Y3B1 194 aa15.3■□□□□ 0.04
SMC4-222ENST00000490207 LINC01619G3V211 115 aa15.29■□□□□ 0.04
SMC4-222ENST00000490207 FCGR3BO75015 233 aa15.29■□□□□ 0.04
SMC4-222ENST00000490207 IGLV2-14P01704 120 aa15.29■□□□□ 0.04
SMC4-222ENST00000490207 IGHV3-11P01762 117 aa15.29■□□□□ 0.04
SMC4-222ENST00000490207 TRGV3P03979 118 aa15.29■□□□□ 0.04
SMC4-222ENST00000490207 OR2B11Q5JQS5 317 aa15.29■□□□□ 0.04
SMC4-222ENST00000490207 OVCH2Q7RTZ1 564 aa15.29■□□□□ 0.04
SMC4-222ENST00000490207 TEX45Q8NA69 505 aa15.29■□□□□ 0.04
SMC4-222ENST00000490207 ZNF355PQ9NSJ1 428 aa15.29■□□□□ 0.04
SMC4-222ENST00000490207 IGHV4OR15-8A0A075B7B6 117 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 A0A087WW49 117 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 H3BUA1 57 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 XRCC3O43542 346 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 SAA1P0DJI8 122 aaPredicted RBP15.28■□□□□ 0.04
SMC4-222ENST00000490207 CBX5P45973 191 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 SLURP1P55000 103 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 RPL30P62888 115 aaKnown RBP15.28■□□□□ 0.04
SMC4-222ENST00000490207 TNXAQ16473 311 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 DEFB121Q5J5C9 76 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 IDO2Q6ZQW0 420 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 SAMD12Q8N8I0 201 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 OR5T1Q8NG75 326 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 DCUN1D4Q92564 292 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 S100A16Q96FQ6 103 aaKnown RBP15.28■□□□□ 0.04
SMC4-222ENST00000490207 TMEM68Q96MH6 324 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 PHB2Q99623 299 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 HSD17B10Q99714 261 aaKnown RBP15.28■□□□□ 0.04
SMC4-222ENST00000490207 DCUN1D5Q9BTE7 237 aa15.28■□□□□ 0.04
SMC4-222ENST00000490207 MEIS3P1A6NDR6 274 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 OVOL1O14753 267 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 RAMP3O60896 148 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 FCER2P06734 321 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 AADACP22760 399 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 FCGR2CP31995 323 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 PRSS8Q16651 343 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 MRGPRG-AS1Q2M3A8 158 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 TMEM69Q5SWH9 247 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 OR13F1Q8NGS4 319 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 OR4S2Q8NH73 311 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 SECTM1Q8WVN6 248 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 TCTEX1D2Q8WW35 142 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 ACOT12Q8WYK0 555 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 SNAPC3Q92966 411 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 FUNDC2Q9BWH2 189 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 IFT46Q9NQC8 304 aa15.27■□□□□ 0.04
SMC4-222ENST00000490207 CREBL2O60519 120 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms