RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 HTR4Q13639 388 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 RCAN2Q14206 197 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 MAD2L1BPQ15013 274 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 JOSD1Q15040 202 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SMIM21Q3B7S5 101 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SPIN3Q5JUX0 258 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CLEC12AQ5QGZ9 265 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PHYHD1Q5SRE7 291 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 C10orf91Q5T1B1 145 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 HENMT1Q5T8I9 393 aaKnown RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SAMD13Q5VXD3 122 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SAXO2Q658L1 398 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR2T2Q6IF00 324 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CLEC2AQ6UVW9 174 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM205Q6UW68 189 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 DPPA3Q6W0C5 159 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 NPSR1Q6W5P4 371 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 Q6ZPB1 254 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 FA2HQ7L5A8 372 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SLC16A13Q7RTY0 426 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 BAP18Q8IXM2 172 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SLC35G3Q8N808 338 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SLC30A7Q8NEW0 376 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR51A2Q8NGJ7 313 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR5D18Q8NGL1 313 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR10D4PQ8NGN7 298 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR4S2Q8NH73 311 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 JOSD2Q8TAC2 188 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 RHEBL1Q8TAI7 183 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ACTL9Q8TC94 416 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 GNPDA2Q8TDQ7 276 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 RXFP4Q8TDU9 374 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 RNF133Q8WVZ7 376 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 MBD3L1Q8WWY6 194 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 NT5C3BQ969T7 300 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ISOC2Q96AB3 205 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 FAM131CQ96AQ9 280 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SLAMF6Q96DU3 332 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 TVP23CQ96ET8 276 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SENP8Q96LD8 212 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PACRGQ96M98 296 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ZFP3Q96NJ6 502 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR2A7Q96R45 310 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR7D2Q96RA2 312 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR52E6Q96RD3 313 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PKMYT1Q99640 499 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ATP5SQ99766 215 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CMSS1Q9BQ75 279 aaKnown RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF649Q9BS31 505 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PSMG3Q9BT73 122 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 FAAP24Q9BTP7 215 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 DOHHQ9BU89 302 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 VAMP8Q9BV40 100 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 MAP1LC3BQ9GZQ8 125 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CHST5Q9GZS9 411 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM126AQ9H061 195 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 FXYD6Q9H0Q3 95 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SLC35B3Q9H1N7 401 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PORCNQ9H237 461 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR51I1Q9H343 314 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 RNF122Q9H9V4 155 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 POPDC3Q9HBV1 291 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CSNK1G1Q9HCP0 422 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 RAB18Q9NP72 206 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ACP6Q9NPH0 428 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PARP11Q9NR21 331 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PXMP2Q9NR77 195 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 TREX1Q9NSU2 369 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 FBXL12Q9NXK8 326 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF586Q9NXT0 402 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SLC2A8Q9NY64 477 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CALYQ9NYX4 217 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PEF1Q9UBV8 284 aaKnown RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 UQCR10Q9UDW1 63 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PISDQ9UG56 409 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CACFD1Q9UGQ2 172 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 STARD10Q9Y365 291 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 FIS1Q9Y3D6 152 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 LSM5Q9Y4Y9 91 aaKnown RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SNX10Q9Y5X0 201 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SEC16AO15027 2179 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 COL1A1P02452 1464 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 RGPD2P0DJD1 1756 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 SIPA1L1O43166 1804 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 DLG5Q8TDM6 1919 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 AKAP11Q9UKA4 1901 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 TRIP11Q15643 1979 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 TNRC18O15417 2968 aaPredicted RBP1.54□□□□□ -2.16
HMGN1-218ENST00000490032 CEP290O15078 2479 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 TRAV9-1A0A075B6T8 112 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 TRAV8-7A0A075B6U6 113 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 hCG_1818297A0A087WSY0 165 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 TRAV1-2A0A0B4J238 106 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 IGHV5-10-1A0A0J9YXX1 117 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 A0A1B0GW64 132 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 A0A1W2PPV4 95 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 DAPL1A0PJW8 107 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 C9orf170A2RU37 121 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 C7orf77A4D0Y5 90 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 PRORSD1PA6NEY8 169 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms