RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 RBMXL1Q96E39 390 aaKnown RBP8.65□□□□□ -1.02
VPS13D-210ENST00000489961 RITA1Q96K30 269 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 FBN1P35555 2871 aaKnown RBP8.64□□□□□ -1.03
VPS13D-210ENST00000489961 SH2D7A6NKC9 451 aaPredicted RBP8.64□□□□□ -1.03
VPS13D-210ENST00000489961 RRHO14718 337 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 SHOXO15266 292 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 FCGR3BO75015 233 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 NDUFA3O95167 84 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 SPDEFO95238 335 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 CRYZL1O95825 349 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 ZNF735P0CB33 412 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 CNTFRP26992 372 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 ECI1P42126 302 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 VDAC2P45880 294 aaPredicted RBP8.64□□□□□ -1.03
VPS13D-210ENST00000489961 LGALS7P47929 136 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 RPL30P62888 115 aaKnown RBP8.64□□□□□ -1.03
VPS13D-210ENST00000489961 PLGLAQ15195 96 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 C5orf64Q2M2E5 130 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 TMEM177Q53S58 311 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 OR2B11Q5JQS5 317 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 AADACL3Q5VUY0 350 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 TRIQKQ629K1 86 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 FAAP20Q6NZ36 180 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 Q6ZS46 218 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 FAM71E2Q8N5Q1 922 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 C3orf56Q8N813 242 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 POC5Q8NA72 575 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 OR4S2Q8NH73 311 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 TERB2Q8NHR7 220 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 OSR1Q8TAX0 266 aaPredicted RBP8.64□□□□□ -1.03
VPS13D-210ENST00000489961 DEDD2Q8WXF8 326 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 S100ZQ8WXG8 99 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 HARBI1Q96MB7 349 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 PRRT1Q99946 306 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 RSRP1Q9BUV0 290 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 MCUBQ9NWR8 336 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 SCP2D1Q9UJQ7 156 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 SIGLEC9Q9Y336 463 aa8.64□□□□□ -1.03
VPS13D-210ENST00000489961 HAX1O00165 279 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 KCNAB3O43448 404 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 PGLYRP1O75594 196 aaPredicted RBP8.63□□□□□ -1.03
VPS13D-210ENST00000489961 PPP5CP53041 499 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 PROK1P58294 105 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 KLF9Q13886 244 aaPredicted RBP8.63□□□□□ -1.03
VPS13D-210ENST00000489961 PSG5Q15238 335 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 PHLDA2Q53GA4 152 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 ZNF57Q68EA5 555 aaPredicted RBP8.63□□□□□ -1.03
VPS13D-210ENST00000489961 LIN54Q6MZP7 749 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 SLC35E3Q7Z769 313 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 FOXRED2Q8IWF2 684 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 OR51H1Q8NH63 302 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 SPATA3Q8NHX4 192 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 ZFAND1Q8TCF1 268 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 ZNF486Q96H40 463 aaPredicted RBP8.63□□□□□ -1.03
VPS13D-210ENST00000489961 GPHA2Q96T91 129 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 FBXL15Q9H469 300 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 SERTAD4Q9NUC0 356 aa8.63□□□□□ -1.03
VPS13D-210ENST00000489961 METTL1Q9UBP6 276 aaKnown RBP8.63□□□□□ -1.03
VPS13D-210ENST00000489961 RBFOX2O43251 390 aaKnown RBP eCLIP8.62□□□□□ -1.03
VPS13D-210ENST00000489961 SLC25A17O43808 307 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 IGHG2P01859 326 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 HLA-DRB1P01911 266 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 RLN1P04808 185 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 VSIG10L2P0DP72 767 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 SURF2Q15527 256 aaPredicted RBP8.62□□□□□ -1.03
VPS13D-210ENST00000489961 BAK1Q16611 211 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 TMEM95Q3KNT9 176 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 VMA21Q3ZAQ7 101 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 IDO2Q6ZQW0 420 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 SPAG16Q8N0X2 631 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 TCTEX1D1Q8N7M0 179 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 CCDC71LQ8N9Z2 235 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 OR51S1Q8NGJ8 323 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 CD300LFQ8TDQ1 290 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 AIFM2Q9BRQ8 373 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 HRASLSQ9HDD0 168 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 AKIP1Q9NQ31 210 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 SLC2A9Q9NRM0 540 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 SLC2A8Q9NY64 477 aa8.62□□□□□ -1.03
VPS13D-210ENST00000489961 AP4M1O00189 453 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 HRASP01112 189 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 IGLV2-23P01705 113 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 IL7P13232 177 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 F2RP25116 425 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 PIGPP57054 158 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 RND3P61587 244 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 TBC1D26Q86UD7 250 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 KLHDC1Q8N7A1 406 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 TEX45Q8NA69 505 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 OR13C8Q8NGS7 320 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 MARCH1Q8TCQ1 289 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 WFDC12Q8WWY7 111 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 SCGB3A2Q96PL1 93 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 SDHCQ99643 169 aaPredicted RBP8.61□□□□□ -1.03
VPS13D-210ENST00000489961 ZNF747Q9BV97 191 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 WDR12Q9GZL7 423 aaKnown RBP8.61□□□□□ -1.03
VPS13D-210ENST00000489961 COPZ2Q9P299 210 aa8.61□□□□□ -1.03
VPS13D-210ENST00000489961 C14orf166Q9Y224 244 aaKnown RBP8.61□□□□□ -1.03
VPS13D-210ENST00000489961 NAP1L6A6NFF2 107 aa8.6□□□□□ -1.03
VPS13D-210ENST00000489961 CENPXA8MT69 81 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms