RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 ARPC4P59998 168 aa13.87□□□□□ -0.19
ABCF3-217ENST00000489719 LSM3P62310 102 aaKnown RBP13.87□□□□□ -0.19
ABCF3-217ENST00000489719 RUNX1Q01196 453 aa13.87□□□□□ -0.19
ABCF3-217ENST00000489719 C19orf54Q5BKX5 351 aa13.87□□□□□ -0.19
ABCF3-217ENST00000489719 ZNF645Q8N7E2 425 aa13.87□□□□□ -0.19
ABCF3-217ENST00000489719 SLC25A38Q96DW6 304 aa13.87□□□□□ -0.19
ABCF3-217ENST00000489719 YIPF6Q96EC8 236 aa13.87□□□□□ -0.19
ABCF3-217ENST00000489719 S100A16Q96FQ6 103 aaKnown RBP13.87□□□□□ -0.19
ABCF3-217ENST00000489719 C5orf30Q96GV9 206 aa13.87□□□□□ -0.19
ABCF3-217ENST00000489719 MS4A10Q96PG2 267 aa13.87□□□□□ -0.19
ABCF3-217ENST00000489719 DCUN1D5Q9BTE7 237 aa13.87□□□□□ -0.19
ABCF3-217ENST00000489719 ZNF355PQ9NSJ1 428 aa13.87□□□□□ -0.19
ABCF3-217ENST00000489719 SOX15O60248 233 aa13.86□□□□□ -0.19
ABCF3-217ENST00000489719 TUSC2O75896 110 aa13.86□□□□□ -0.19
ABCF3-217ENST00000489719 IGLV2-23P01705 113 aa13.86□□□□□ -0.19
ABCF3-217ENST00000489719 RPS19P39019 145 aaKnown RBP13.86□□□□□ -0.19
ABCF3-217ENST00000489719 ZNF616Q08AN1 781 aa13.86□□□□□ -0.19
ABCF3-217ENST00000489719 VMA21Q3ZAQ7 101 aa13.86□□□□□ -0.19
ABCF3-217ENST00000489719 C9orf66Q5T8R8 295 aa13.86□□□□□ -0.19
ABCF3-217ENST00000489719 BEST4Q8NFU0 473 aa13.86□□□□□ -0.19
ABCF3-217ENST00000489719 CASTOR1Q8WTX7 329 aa13.86□□□□□ -0.19
ABCF3-217ENST00000489719 TPSG1Q9NRR2 321 aa13.86□□□□□ -0.19
ABCF3-217ENST00000489719 PRELID3BQ9Y3B1 194 aa13.86□□□□□ -0.19
ABCF3-217ENST00000489719 SRRM4A7MD48 611 aaKnown RBP13.85□□□□□ -0.19
ABCF3-217ENST00000489719 SEC14L6B5MCN3 397 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 K7EIL1 84 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 CRYZL1O95825 349 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 CRYGBP07316 175 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 TGFBR1P36897 503 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 DGCR2P98153 550 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 PJVKQ0ZLH3 352 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 FHL3Q13643 280 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 HOGA1Q86XE5 327 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 TEX45Q8NA69 505 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 OR5T1Q8NG75 326 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 DDB2Q92466 427 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 TMEM68Q96MH6 324 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 SLA2Q9H6Q3 261 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 AUNIPQ9H7T9 357 aa13.85□□□□□ -0.19
ABCF3-217ENST00000489719 RBMX2Q9Y388 322 aaKnown RBP13.85□□□□□ -0.19
ABCF3-217ENST00000489719 WI2-2373I1.2A0A1W2PRP0 233 aa13.84□□□□□ -0.19
ABCF3-217ENST00000489719 LINC00473A8K010 186 aa13.84□□□□□ -0.19
ABCF3-217ENST00000489719 ARPC1BO15143 372 aaKnown RBP13.84□□□□□ -0.19
ABCF3-217ENST00000489719 RAMP3O60896 148 aa13.84□□□□□ -0.19
ABCF3-217ENST00000489719 FCGR3BO75015 233 aa13.84□□□□□ -0.19
ABCF3-217ENST00000489719 CBX5P45973 191 aa13.84□□□□□ -0.19
ABCF3-217ENST00000489719 TPPP2P59282 170 aa13.84□□□□□ -0.19
ABCF3-217ENST00000489719 GVQW1Q8N7I0 195 aa13.84□□□□□ -0.19
ABCF3-217ENST00000489719 OSR1Q8TAX0 266 aaPredicted RBP13.84□□□□□ -0.19
ABCF3-217ENST00000489719 PRKDCP78527 4128 aaKnown RBP13.84□□□□□ -0.19
ABCF3-217ENST00000489719 XRCC3O43542 346 aa13.83□□□□□ -0.2
ABCF3-217ENST00000489719 TRGV3P03979 118 aa13.83□□□□□ -0.2
ABCF3-217ENST00000489719 FCGR2CP31995 323 aa13.83□□□□□ -0.2
ABCF3-217ENST00000489719 UBE2KP61086 200 aa13.83□□□□□ -0.2
ABCF3-217ENST00000489719 PHB2Q99623 299 aa13.83□□□□□ -0.2
ABCF3-217ENST00000489719 HSD17B10Q99714 261 aaKnown RBP13.83□□□□□ -0.2
ABCF3-217ENST00000489719 MRPS7Q9Y2R9 242 aaKnown RBP13.83□□□□□ -0.2
ABCF3-217ENST00000489719 IGKV1D-13A0A0B4J2D9 117 aa13.82□□□□□ -0.2
ABCF3-217ENST00000489719 LINC01619G3V211 115 aa13.82□□□□□ -0.2
ABCF3-217ENST00000489719 ACTL6BO94805 426 aa13.82□□□□□ -0.2
ABCF3-217ENST00000489719 IGHV3-11P01762 117 aa13.82□□□□□ -0.2
ABCF3-217ENST00000489719 LGALS1P09382 135 aaKnown RBP13.82□□□□□ -0.2
ABCF3-217ENST00000489719 IGKV1-13P0DP09 117 aa13.82□□□□□ -0.2
ABCF3-217ENST00000489719 PRSS8Q16651 343 aa13.82□□□□□ -0.2
ABCF3-217ENST00000489719 UBE2NLQ5JXB2 153 aa13.82□□□□□ -0.2
ABCF3-217ENST00000489719 KCTD9Q7L273 389 aa13.82□□□□□ -0.2
ABCF3-217ENST00000489719 POC5Q8NA72 575 aa13.82□□□□□ -0.2
ABCF3-217ENST00000489719 RHOVQ96L33 236 aa13.82□□□□□ -0.2
ABCF3-217ENST00000489719 ALX4Q9H161 411 aaPredicted RBP13.82□□□□□ -0.2
ABCF3-217ENST00000489719 A0A0G2JLM5 398 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 C13orf42A0A1B0GVH6 325 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 MSGN1A6NI15 193 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 H3BUA1 57 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 OVOL1O14753 267 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 CREBL2O60519 120 aaPredicted RBP13.81□□□□□ -0.2
ABCF3-217ENST00000489719 HSPB1P04792 205 aaKnown RBP13.81□□□□□ -0.2
ABCF3-217ENST00000489719 FCER2P06734 321 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 INSL3P51460 131 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 RPL30P62888 115 aaKnown RBP13.81□□□□□ -0.2
ABCF3-217ENST00000489719 TNXAQ16473 311 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 OR2B11Q5JQS5 317 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 MFSD4AQ8N468 514 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 SAMD12Q8N8I0 201 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 SECTM1Q8WVN6 248 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 TCTEX1D2Q8WW35 142 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 DCUN1D4Q92564 292 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 FUNDC2Q9BWH2 189 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 IFT46Q9NQC8 304 aa13.81□□□□□ -0.2
ABCF3-217ENST00000489719 TRIM64CA6NLI5 447 aa13.8□□□□□ -0.2
ABCF3-217ENST00000489719 IGLV2-14P01704 120 aa13.8□□□□□ -0.2
ABCF3-217ENST00000489719 PTHLHP12272 177 aa13.8□□□□□ -0.2
ABCF3-217ENST00000489719 AADACP22760 399 aa13.8□□□□□ -0.2
ABCF3-217ENST00000489719 ECI1P42126 302 aa13.8□□□□□ -0.2
ABCF3-217ENST00000489719 SSBP2P81877 361 aaPredicted RBP13.8□□□□□ -0.2
ABCF3-217ENST00000489719 DCTN2Q13561 401 aaKnown RBP13.8□□□□□ -0.2
ABCF3-217ENST00000489719 TMEM69Q5SWH9 247 aa13.8□□□□□ -0.2
ABCF3-217ENST00000489719 ASPHD1Q5U4P2 390 aa13.8□□□□□ -0.2
ABCF3-217ENST00000489719 ZNF66Q6ZN08 573 aa13.8□□□□□ -0.2
ABCF3-217ENST00000489719 IDO2Q6ZQW0 420 aa13.8□□□□□ -0.2
ABCF3-217ENST00000489719 OR5AP2Q8NGF4 316 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms