RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 DHRS7BQ6IAN0 325 aaPredicted RBP17.57■□□□□ 0.4
SMC4-221ENST00000489573 PRSS57Q6UWY2 283 aa17.57■□□□□ 0.4
SMC4-221ENST00000489573 OR5AN1Q8NGI8 311 aa17.57■□□□□ 0.4
SMC4-221ENST00000489573 THAP6Q8TBB0 222 aa17.57■□□□□ 0.4
SMC4-221ENST00000489573 R3HDM4Q96D70 268 aa17.57■□□□□ 0.4
SMC4-221ENST00000489573 TBX15Q96SF7 602 aa17.57■□□□□ 0.4
SMC4-221ENST00000489573 RNASEK-C17orf49H0YIS7 233 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 H0YJW9 148 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 CRYZL1O95825 349 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 SCGB1D2O95969 90 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 MSMBP08118 114 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 PET100P0DJ07 73 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 RRASP10301 218 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 S100A10P60903 97 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 PAX8Q06710 450 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 SMCO1Q147U7 214 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 C1orf159Q96HA4 380 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 MBD2Q9UBB5 411 aa17.56■□□□□ 0.4
SMC4-221ENST00000489573 MARCH11A6NNE9 402 aa17.55■□□□□ 0.4
SMC4-221ENST00000489573 B4DSR2 109 aa17.55■□□□□ 0.4
SMC4-221ENST00000489573 LY6LH3BQJ8 138 aa17.55■□□□□ 0.4
SMC4-221ENST00000489573 TXNL1O43396 289 aa17.55■□□□□ 0.4
SMC4-221ENST00000489573 GAPDHP04406 335 aaKnown RBP17.55■□□□□ 0.4
SMC4-221ENST00000489573 P0C879 139 aa17.55■□□□□ 0.4
SMC4-221ENST00000489573 HTR1DP28221 377 aa17.55■□□□□ 0.4
SMC4-221ENST00000489573 ERVK-16P61578 105 aa17.55■□□□□ 0.4
SMC4-221ENST00000489573 IZUMO4Q1ZYL8 232 aa17.55■□□□□ 0.4
SMC4-221ENST00000489573 RPEQ96AT9 228 aa17.55■□□□□ 0.4
SMC4-221ENST00000489573 ZFP57Q9NU63 452 aa17.55■□□□□ 0.4
SMC4-221ENST00000489573 CACNG5Q9UF02 275 aa17.55■□□□□ 0.4
SMC4-221ENST00000489573 CELSR2Q9HCU4 2923 aa17.54■□□□□ 0.4
SMC4-221ENST00000489573 HMSDA8MTL9 139 aa17.54■□□□□ 0.4
SMC4-221ENST00000489573 MBPP02686 304 aaPredicted RBP17.54■□□□□ 0.4
SMC4-221ENST00000489573 NQO2P16083 231 aa17.54■□□□□ 0.4
SMC4-221ENST00000489573 LOXL1Q08397 574 aaPredicted RBP17.54■□□□□ 0.4
SMC4-221ENST00000489573 Q6ZRM9 215 aa17.54■□□□□ 0.4
SMC4-221ENST00000489573 H2BFWTQ7Z2G1 175 aa17.54■□□□□ 0.4
SMC4-221ENST00000489573 C9orf62Q8N4C0 152 aa17.54■□□□□ 0.4
SMC4-221ENST00000489573 OR1S1Q8NH92 325 aa17.54■□□□□ 0.4
SMC4-221ENST00000489573 DPM3Q9P2X0 92 aa17.54■□□□□ 0.4
SMC4-221ENST00000489573 LEUTXA8MZ59 168 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 PITX3O75364 302 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 CEACAM3P40198 252 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 NKX2-1P43699 371 aaPredicted RBP17.53■□□□□ 0.4
SMC4-221ENST00000489573 TPTE2P1Q5T6R2 138 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 PRSS54Q6PEW0 395 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 PDPNQ86YL7 162 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 KRTAP1-3Q8IUG1 177 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 PDZD9Q8IXQ8 264 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 DMBX1Q8NFW5 382 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 LSM5Q9Y4Y9 91 aaKnown RBP17.53■□□□□ 0.4
SMC4-221ENST00000489573 TEX15Q9BXT5 2789 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 H0YIZ8 118 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 H7C2Y5 167 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 ARPC5O15511 151 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 RAB13P51153 203 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 LAMTOR1Q6IAA8 161 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 TMEM65Q6PI78 240 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 FOXRED2Q8IWF2 684 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 LHX4Q969G2 390 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 RNF126Q9BV68 326 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 REG4Q9BYZ8 158 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 COA4Q9NYJ1 87 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 WASHC3Q9Y3C0 194 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 POMT1Q9Y6A1 747 aa17.53■□□□□ 0.4
SMC4-221ENST00000489573 IGHV1-3A0A0C4DH29 117 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 A0A1W2PRD5 423 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 A0A1W2PRF3 423 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 A0A1W2PRM7 423 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 RNF223E7ERA6 249 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 K7EPK0 472 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 ST8SIA3O43173 380 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 HRASP01112 189 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 RLN2P04090 185 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 IGKV1-16P04430 117 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 LYL1P12980 280 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 MC5RP33032 325 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 UBE2E1P51965 193 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 LDLRAD2Q5SZI1 272 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 ZNF546Q86UE3 836 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 FAM71E2Q8N5Q1 922 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 Q96MF0 132 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 OR5AC2Q9NZP5 309 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 HSPB11Q9Y547 144 aa17.52■□□□□ 0.39
SMC4-221ENST00000489573 CENPEQ02224 2701 aa17.51■□□□□ 0.39
SMC4-221ENST00000489573 TRAV20A0A0B4J274 112 aa17.51■□□□□ 0.39
SMC4-221ENST00000489573 DEDDO75618 318 aa17.51■□□□□ 0.39
SMC4-221ENST00000489573 SNAPC5O75971 98 aa17.51■□□□□ 0.39
SMC4-221ENST00000489573 MIDNQ504T8 468 aa17.51■□□□□ 0.39
SMC4-221ENST00000489573 MINOS1Q5TGZ0 78 aa17.51■□□□□ 0.39
SMC4-221ENST00000489573 SSX9Q7RTT3 188 aa17.51■□□□□ 0.39
SMC4-221ENST00000489573 LINC01356Q8N9X3 169 aa17.51■□□□□ 0.39
SMC4-221ENST00000489573 OSR1Q8TAX0 266 aaPredicted RBP17.51■□□□□ 0.39
SMC4-221ENST00000489573 DCUN1D4Q92564 292 aa17.51■□□□□ 0.39
SMC4-221ENST00000489573 MINOS1-NBL1R4GNA1 71 aa17.51■□□□□ 0.39
SMC4-221ENST00000489573 UNC79Q9P2D8 2635 aa17.51■□□□□ 0.39
SMC4-221ENST00000489573 LGALS4P56470 323 aa17.5■□□□□ 0.39
SMC4-221ENST00000489573 ID3Q02535 119 aa17.5■□□□□ 0.39
SMC4-221ENST00000489573 POU2AF1Q16633 256 aa17.5■□□□□ 0.39
SMC4-221ENST00000489573 TMEM177Q53S58 311 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms